Hb_000270_830

Information

Type -
Description -
Location Contig270: 680826-685633
Sequence    

Annotation

kegg
ID rcu:RCOM_1511330
description aldehyde dehydrogenase, putative (EC:1.2.1.36)
nr
ID XP_002511424.1
description aldehyde dehydrogenase, putative [Ricinus communis]
swissprot
ID Q9SU63
description Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=2 SV=1
trembl
ID B9RB49
description Aldehyde dehydrogenase, putative OS=Ricinus communis GN=RCOM_1511330 PE=3 SV=1
Gene Ontology
ID GO:0009507
description aldehyde dehydrogenase family 2 member mitochondrial-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28284: 680847-685576
cDNA
(Sanger)
(ID:Location)		 012_M16.ab1: 680847-682904 , 016_E10.ab1: 680847-682882 , 042_J18.ab1: 684320-685457

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000270_830 0.0 - - aldehyde dehydrogenase, putative [Ricinus communis]
2 Hb_000270_710 0.1252736884 - - PREDICTED: WAT1-related protein At5g40240-like isoform X1 [Jatropha curcas]
3 Hb_025045_010 0.1374250183 - - catalytic, putative [Ricinus communis]
4 Hb_000997_290 0.1383707226 - - PREDICTED: acylamino-acid-releasing enzyme [Jatropha curcas]
5 Hb_027380_150 0.143257915 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001969_130 0.1436480952 - - PREDICTED: molybdate transporter 2 [Jatropha curcas]
7 Hb_000487_370 0.1459088126 - - -
8 Hb_022425_050 0.1476664466 - - PREDICTED: probable lactoylglutathione lyase, chloroplast isoform X1 [Jatropha curcas]
9 Hb_000414_080 0.1505629363 - - PREDICTED: triosephosphate isomerase, chloroplastic [Jatropha curcas]
10 Hb_001269_520 0.1515697037 - - PREDICTED: putative receptor-like protein kinase At1g80870 [Jatropha curcas]
11 Hb_172632_130 0.1525693267 - - hypothetical protein JCGZ_22584 [Jatropha curcas]
12 Hb_003687_010 0.1529999398 - - Cysteine-rich RLK 29, putative [Theobroma cacao]
13 Hb_002026_030 0.1555172488 desease resistance Gene Name: NB-ARC PREDICTED: mitogen-activated protein kinase kinase kinase YODA [Jatropha curcas]
14 Hb_001153_100 0.156267308 transcription factor TF Family: HB PREDICTED: homeobox protein HD1 [Jatropha curcas]
15 Hb_002759_100 0.1580057144 - - hypothetical protein JCGZ_21777 [Jatropha curcas]
16 Hb_001195_370 0.1596412707 - - -
17 Hb_001999_320 0.1612196778 transcription factor TF Family: MYB-related PREDICTED: transcription factor DIVARICATA [Jatropha curcas]
18 Hb_011174_080 0.1628485815 - - PREDICTED: sulfite oxidase [Jatropha curcas]
19 Hb_005305_120 0.1632697221 - - PREDICTED: calcium-dependent protein kinase 8-like [Jatropha curcas]
20 Hb_007765_130 0.1633996784 - - PREDICTED: UPF0503 protein At3g09070, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000270_830 Hb_000270_830 Hb_000270_710 Hb_000270_710 Hb_000270_830--Hb_000270_710 Hb_025045_010 Hb_025045_010 Hb_000270_830--Hb_025045_010 Hb_000997_290 Hb_000997_290 Hb_000270_830--Hb_000997_290 Hb_027380_150 Hb_027380_150 Hb_000270_830--Hb_027380_150 Hb_001969_130 Hb_001969_130 Hb_000270_830--Hb_001969_130 Hb_000487_370 Hb_000487_370 Hb_000270_830--Hb_000487_370 Hb_002320_090 Hb_002320_090 Hb_000270_710--Hb_002320_090 Hb_000696_190 Hb_000696_190 Hb_000270_710--Hb_000696_190 Hb_006916_030 Hb_006916_030 Hb_000270_710--Hb_006916_030 Hb_035834_010 Hb_035834_010 Hb_000270_710--Hb_035834_010 Hb_000964_170 Hb_000964_170 Hb_000270_710--Hb_000964_170 Hb_001821_060 Hb_001821_060 Hb_025045_010--Hb_001821_060 Hb_013968_010 Hb_013968_010 Hb_025045_010--Hb_013968_010 Hb_002026_030 Hb_002026_030 Hb_025045_010--Hb_002026_030 Hb_003912_080 Hb_003912_080 Hb_025045_010--Hb_003912_080 Hb_007765_130 Hb_007765_130 Hb_025045_010--Hb_007765_130 Hb_002888_040 Hb_002888_040 Hb_025045_010--Hb_002888_040 Hb_001195_370 Hb_001195_370 Hb_000997_290--Hb_001195_370 Hb_009193_010 Hb_009193_010 Hb_000997_290--Hb_009193_010 Hb_000329_080 Hb_000329_080 Hb_000997_290--Hb_000329_080 Hb_000066_040 Hb_000066_040 Hb_000997_290--Hb_000066_040 Hb_001425_010 Hb_001425_010 Hb_000997_290--Hb_001425_010 Hb_011174_080 Hb_011174_080 Hb_000997_290--Hb_011174_080 Hb_000791_050 Hb_000791_050 Hb_027380_150--Hb_000791_050 Hb_010050_020 Hb_010050_020 Hb_027380_150--Hb_010050_020 Hb_000776_040 Hb_000776_040 Hb_027380_150--Hb_000776_040 Hb_021409_070 Hb_021409_070 Hb_027380_150--Hb_021409_070 Hb_189003_070 Hb_189003_070 Hb_027380_150--Hb_189003_070 Hb_012807_150 Hb_012807_150 Hb_027380_150--Hb_012807_150 Hb_000665_200 Hb_000665_200 Hb_001969_130--Hb_000665_200 Hb_001124_140 Hb_001124_140 Hb_001969_130--Hb_001124_140 Hb_001969_130--Hb_002026_030 Hb_022425_050 Hb_022425_050 Hb_001969_130--Hb_022425_050 Hb_001969_130--Hb_000066_040 Hb_001221_300 Hb_001221_300 Hb_001969_130--Hb_001221_300 Hb_000414_080 Hb_000414_080 Hb_000487_370--Hb_000414_080 Hb_000510_190 Hb_000510_190 Hb_000487_370--Hb_000510_190 Hb_000594_060 Hb_000594_060 Hb_000487_370--Hb_000594_060 Hb_004052_110 Hb_004052_110 Hb_000487_370--Hb_004052_110 Hb_001059_060 Hb_001059_060 Hb_000487_370--Hb_001059_060 Hb_002249_080 Hb_002249_080 Hb_000487_370--Hb_002249_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
42.242 64.6565 82.5721 109.884 7.76436 12.2287
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
20.3034 4.47252 5.45493 54.9957 168.919

CAGE analysis