Hb_011174_080

Information

Type -
Description -
Location Contig11174: 32737-41512
Sequence    

Annotation

kegg
ID rcu:RCOM_1677230
description sulfite reductase, putative (EC:1.8.3.1)
nr
ID XP_012070455.1
description PREDICTED: sulfite oxidase [Jatropha curcas]
swissprot
ID Q9S850
description Sulfite oxidase OS=Arabidopsis thaliana GN=SOX PE=1 SV=1
trembl
ID A0A067LCU1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10126 PE=4 SV=1
Gene Ontology
ID GO:0005739
description sulfite oxidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03571: 32468-41368 , PASA_asmbl_03572: 32479-35991
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011174_080 0.0 - - PREDICTED: sulfite oxidase [Jatropha curcas]
2 Hb_001235_130 0.0783099438 - - -
3 Hb_000157_140 0.0934197885 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
4 Hb_002805_090 0.0967799503 - - Ran GTPase binding protein, putative [Ricinus communis]
5 Hb_000256_160 0.0973053088 transcription factor TF Family: HB PREDICTED: homeobox protein knotted-1-like 3-like isoform X1 [Glycine max]
6 Hb_029879_120 0.0979183687 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001702_050 0.1035570833 - - PREDICTED: probable protein S-acyltransferase 19 isoform X1 [Jatropha curcas]
8 Hb_005854_040 0.1043002664 - - conserved hypothetical protein [Ricinus communis]
9 Hb_006185_030 0.1062911679 - - threonine synthase, putative [Ricinus communis]
10 Hb_007229_050 0.1064147817 - - PREDICTED: palmitoyl-protein thioesterase 1 isoform X1 [Jatropha curcas]
11 Hb_010407_030 0.1093692001 - - PREDICTED: casein kinase I-like [Jatropha curcas]
12 Hb_009193_010 0.1119360834 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Jatropha curcas]
13 Hb_000019_010 0.1119416518 - - PREDICTED: long chain base biosynthesis protein 2a [Jatropha curcas]
14 Hb_000066_040 0.1136124155 - - PREDICTED: CDPK-related kinase 7-like [Populus euphratica]
15 Hb_000487_370 0.1136714982 - - -
16 Hb_000540_100 0.1142086152 - - PREDICTED: BTB/POZ domain-containing protein At5g60050 [Jatropha curcas]
17 Hb_029695_120 0.1165019419 - - hypothetical protein POPTR_0002s05320g [Populus trichocarpa]
18 Hb_001439_070 0.1167379125 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
19 Hb_030312_030 0.1169524399 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40 isoform X1 [Jatropha curcas]
20 Hb_001059_060 0.1170203615 - - PREDICTED: bifunctional riboflavin kinase/FMN phosphatase [Jatropha curcas]

Gene co-expression network

sample Hb_011174_080 Hb_011174_080 Hb_001235_130 Hb_001235_130 Hb_011174_080--Hb_001235_130 Hb_000157_140 Hb_000157_140 Hb_011174_080--Hb_000157_140 Hb_002805_090 Hb_002805_090 Hb_011174_080--Hb_002805_090 Hb_000256_160 Hb_000256_160 Hb_011174_080--Hb_000256_160 Hb_029879_120 Hb_029879_120 Hb_011174_080--Hb_029879_120 Hb_001702_050 Hb_001702_050 Hb_011174_080--Hb_001702_050 Hb_001235_130--Hb_000256_160 Hb_007229_050 Hb_007229_050 Hb_001235_130--Hb_007229_050 Hb_005854_040 Hb_005854_040 Hb_001235_130--Hb_005854_040 Hb_005588_120 Hb_005588_120 Hb_001235_130--Hb_005588_120 Hb_009535_030 Hb_009535_030 Hb_001235_130--Hb_009535_030 Hb_004030_060 Hb_004030_060 Hb_000157_140--Hb_004030_060 Hb_007537_030 Hb_007537_030 Hb_000157_140--Hb_007537_030 Hb_000157_140--Hb_007229_050 Hb_007317_020 Hb_007317_020 Hb_000157_140--Hb_007317_020 Hb_000570_020 Hb_000570_020 Hb_000157_140--Hb_000570_020 Hb_002311_130 Hb_002311_130 Hb_002805_090--Hb_002311_130 Hb_005116_140 Hb_005116_140 Hb_002805_090--Hb_005116_140 Hb_000066_040 Hb_000066_040 Hb_002805_090--Hb_000066_040 Hb_001998_220 Hb_001998_220 Hb_002805_090--Hb_001998_220 Hb_000025_500 Hb_000025_500 Hb_002805_090--Hb_000025_500 Hb_003226_090 Hb_003226_090 Hb_000256_160--Hb_003226_090 Hb_000094_150 Hb_000094_150 Hb_000256_160--Hb_000094_150 Hb_004129_010 Hb_004129_010 Hb_000256_160--Hb_004129_010 Hb_000256_160--Hb_005588_120 Hb_002010_090 Hb_002010_090 Hb_000256_160--Hb_002010_090 Hb_029879_120--Hb_001702_050 Hb_003125_180 Hb_003125_180 Hb_029879_120--Hb_003125_180 Hb_000019_010 Hb_000019_010 Hb_029879_120--Hb_000019_010 Hb_029879_120--Hb_001235_130 Hb_000157_070 Hb_000157_070 Hb_029879_120--Hb_000157_070 Hb_001702_050--Hb_001998_220 Hb_000985_050 Hb_000985_050 Hb_001702_050--Hb_000985_050 Hb_005000_090 Hb_005000_090 Hb_001702_050--Hb_005000_090 Hb_021977_010 Hb_021977_010 Hb_001702_050--Hb_021977_010 Hb_001702_050--Hb_003125_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.26853 9.9775 10.4124 15.8788 1.72803 4.15643
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.48863 2.40725 1.48357 13.4029 20.2063

CAGE analysis