Hb_000157_070

Information

Type -
Description -
Location Contig157: 51393-61145
Sequence    

Annotation

kegg
ID pop:POPTR_0009s06320g
description POPTRDRAFT_1087870; hypothetical protein
nr
ID XP_012065604.1
description PREDICTED: alpha-N-acetylglucosaminidase [Jatropha curcas]
swissprot
ID P54802
description Alpha-N-acetylglucosaminidase OS=Homo sapiens GN=NAGLU PE=1 SV=2
trembl
ID A0A067L8I2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16850 PE=4 SV=1
Gene Ontology
ID GO:0005773
description alpha-n-acetylglucosaminidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13678: 56675-61129 , PASA_asmbl_13679: 51587-57563 , PASA_asmbl_13680: 57906-59568
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000157_070 0.0 - - PREDICTED: alpha-N-acetylglucosaminidase [Jatropha curcas]
2 Hb_135959_010 0.0702356906 - - hypothetical protein JCGZ_07060 [Jatropha curcas]
3 Hb_020805_180 0.0734811128 - - PREDICTED: epidermal growth factor receptor substrate 15-like 1 [Jatropha curcas]
4 Hb_002851_010 0.0787564747 - - sugar transporter, putative [Ricinus communis]
5 Hb_080147_050 0.0853091348 - - PREDICTED: probable plastidic glucose transporter 2 [Jatropha curcas]
6 Hb_000342_050 0.0879737129 - - hypothetical protein POPTR_0006s24710g [Populus trichocarpa]
7 Hb_003626_050 0.0896343539 - - malic enzyme, putative [Ricinus communis]
8 Hb_000321_090 0.0916075813 - - PREDICTED: calcium-transporting ATPase 1, endoplasmic reticulum-type-like [Jatropha curcas]
9 Hb_004837_280 0.0917233472 - - PREDICTED: uncharacterized protein LOC105648296 [Jatropha curcas]
10 Hb_158845_060 0.0933654856 - - PREDICTED: nudix hydrolase 3 isoform X1 [Jatropha curcas]
11 Hb_003125_180 0.0951908556 - - hypothetical protein JCGZ_26440 [Jatropha curcas]
12 Hb_012325_010 0.0994190815 - - hypothetical protein RCOM_0068670 [Ricinus communis]
13 Hb_001900_100 0.0995320578 - - PREDICTED: uncharacterized protein LOC105632664 isoform X1 [Jatropha curcas]
14 Hb_002213_090 0.1006626317 - - PREDICTED: uncharacterized protein LOC105640147 [Jatropha curcas]
15 Hb_107298_010 0.1019615652 - - PREDICTED: E3 ubiquitin-protein ligase RHF2A isoform X2 [Jatropha curcas]
16 Hb_000019_170 0.102366028 - - PREDICTED: alpha-mannosidase [Jatropha curcas]
17 Hb_001322_180 0.1026884495 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 26 [Jatropha curcas]
18 Hb_103688_010 0.1028090968 - - PREDICTED: sucrose-phosphatase 2-like [Jatropha curcas]
19 Hb_000834_230 0.1034198858 - - PREDICTED: ras-related protein RHN1-like [Jatropha curcas]
20 Hb_000049_250 0.1034324021 - - PREDICTED: uncharacterized protein LOC105644455 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000157_070 Hb_000157_070 Hb_135959_010 Hb_135959_010 Hb_000157_070--Hb_135959_010 Hb_020805_180 Hb_020805_180 Hb_000157_070--Hb_020805_180 Hb_002851_010 Hb_002851_010 Hb_000157_070--Hb_002851_010 Hb_080147_050 Hb_080147_050 Hb_000157_070--Hb_080147_050 Hb_000342_050 Hb_000342_050 Hb_000157_070--Hb_000342_050 Hb_003626_050 Hb_003626_050 Hb_000157_070--Hb_003626_050 Hb_135959_010--Hb_002851_010 Hb_135959_010--Hb_020805_180 Hb_158845_060 Hb_158845_060 Hb_135959_010--Hb_158845_060 Hb_002027_190 Hb_002027_190 Hb_135959_010--Hb_002027_190 Hb_007747_170 Hb_007747_170 Hb_135959_010--Hb_007747_170 Hb_020805_180--Hb_080147_050 Hb_000321_090 Hb_000321_090 Hb_020805_180--Hb_000321_090 Hb_020805_180--Hb_002851_010 Hb_000649_060 Hb_000649_060 Hb_020805_180--Hb_000649_060 Hb_020805_180--Hb_002027_190 Hb_002851_010--Hb_002027_190 Hb_002851_010--Hb_000649_060 Hb_003058_200 Hb_003058_200 Hb_002851_010--Hb_003058_200 Hb_080147_050--Hb_000321_090 Hb_000834_230 Hb_000834_230 Hb_080147_050--Hb_000834_230 Hb_000787_200 Hb_000787_200 Hb_080147_050--Hb_000787_200 Hb_080147_050--Hb_158845_060 Hb_007245_020 Hb_007245_020 Hb_080147_050--Hb_007245_020 Hb_004837_280 Hb_004837_280 Hb_000342_050--Hb_004837_280 Hb_001811_170 Hb_001811_170 Hb_000342_050--Hb_001811_170 Hb_001226_130 Hb_001226_130 Hb_000342_050--Hb_001226_130 Hb_000342_050--Hb_000787_200 Hb_001587_030 Hb_001587_030 Hb_000342_050--Hb_001587_030 Hb_000152_700 Hb_000152_700 Hb_000342_050--Hb_000152_700 Hb_002213_090 Hb_002213_090 Hb_003626_050--Hb_002213_090 Hb_107298_010 Hb_107298_010 Hb_003626_050--Hb_107298_010 Hb_000505_100 Hb_000505_100 Hb_003626_050--Hb_000505_100 Hb_001500_070 Hb_001500_070 Hb_003626_050--Hb_001500_070 Hb_006829_100 Hb_006829_100 Hb_003626_050--Hb_006829_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.59651 5.4816 4.5718 7.02191 2.06132 3.33674
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.8237 1.65888 1.35671 10.1286 5.68733

CAGE analysis