Hb_001587_030

Information

Type -
Description -
Location Contig1587: 22787-30083
Sequence    

Annotation

kegg
ID rcu:RCOM_0816850
description Palmitoyltransferase TIP1, putative (EC:1.3.1.74)
nr
ID KDP35920.1
description hypothetical protein JCGZ_09892 [Jatropha curcas]
swissprot
ID Q3EC11
description Probable protein S-acyltransferase 23 OS=Arabidopsis thaliana GN=PAT23 PE=2 SV=2
trembl
ID A0A067KUG2
description S-acyltransferase OS=Jatropha curcas GN=JCGZ_09892 PE=3 SV=1
Gene Ontology
ID GO:0005515
description probable protein s-acyltransferase 23

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001587_030 0.0 - - hypothetical protein JCGZ_09892 [Jatropha curcas]
2 Hb_001226_130 0.0400509725 - - PREDICTED: aminopeptidase M1-like [Jatropha curcas]
3 Hb_000649_060 0.0563427421 - - PREDICTED: E3 ubiquitin protein ligase RIE1 [Jatropha curcas]
4 Hb_065500_020 0.0651292152 - - Exocyst complex component sec3A isoform 1 [Theobroma cacao]
5 Hb_060980_010 0.0678244964 - - PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1 [Populus euphratica]
6 Hb_004837_280 0.0689832813 - - PREDICTED: uncharacterized protein LOC105648296 [Jatropha curcas]
7 Hb_000890_070 0.071088658 - - PREDICTED: protein ALWAYS EARLY 3 isoform X2 [Jatropha curcas]
8 Hb_001811_170 0.0727973824 - - dynamin, putative [Ricinus communis]
9 Hb_000342_050 0.0750540588 - - hypothetical protein POPTR_0006s24710g [Populus trichocarpa]
10 Hb_000406_210 0.0753226869 - - PREDICTED: protein HASTY 1 [Jatropha curcas]
11 Hb_008289_040 0.0754973146 - - PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Jatropha curcas]
12 Hb_005846_050 0.0760830383 - - PREDICTED: calmodulin-binding transcription activator 3 [Jatropha curcas]
13 Hb_080147_050 0.0776403485 - - PREDICTED: probable plastidic glucose transporter 2 [Jatropha curcas]
14 Hb_000009_030 0.0784981968 - - PREDICTED: splicing factor U2af large subunit B isoform X1 [Jatropha curcas]
15 Hb_016172_030 0.0795419442 - - PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Jatropha curcas]
16 Hb_003280_020 0.0796302975 - - PREDICTED: enhancer of mRNA-decapping protein 4 isoform X1 [Jatropha curcas]
17 Hb_002749_060 0.0805717058 - - PREDICTED: protein transport protein Sec61 subunit alpha-like [Jatropha curcas]
18 Hb_000152_700 0.0812107889 - - PREDICTED: E3 ubiquitin protein ligase RIN2 [Jatropha curcas]
19 Hb_004450_070 0.0817355813 - - PREDICTED: 2-hydroxyacyl-CoA lyase [Jatropha curcas]
20 Hb_004096_110 0.081793606 - - PREDICTED: T-complex protein 1 subunit gamma-like [Jatropha curcas]

Gene co-expression network

sample Hb_001587_030 Hb_001587_030 Hb_001226_130 Hb_001226_130 Hb_001587_030--Hb_001226_130 Hb_000649_060 Hb_000649_060 Hb_001587_030--Hb_000649_060 Hb_065500_020 Hb_065500_020 Hb_001587_030--Hb_065500_020 Hb_060980_010 Hb_060980_010 Hb_001587_030--Hb_060980_010 Hb_004837_280 Hb_004837_280 Hb_001587_030--Hb_004837_280 Hb_000890_070 Hb_000890_070 Hb_001587_030--Hb_000890_070 Hb_001226_130--Hb_000649_060 Hb_001811_170 Hb_001811_170 Hb_001226_130--Hb_001811_170 Hb_000342_050 Hb_000342_050 Hb_001226_130--Hb_000342_050 Hb_001226_130--Hb_004837_280 Hb_000152_700 Hb_000152_700 Hb_001226_130--Hb_000152_700 Hb_020805_180 Hb_020805_180 Hb_000649_060--Hb_020805_180 Hb_000649_060--Hb_000890_070 Hb_004450_070 Hb_004450_070 Hb_000649_060--Hb_004450_070 Hb_000649_060--Hb_000152_700 Hb_065500_020--Hb_060980_010 Hb_002749_060 Hb_002749_060 Hb_065500_020--Hb_002749_060 Hb_016172_030 Hb_016172_030 Hb_065500_020--Hb_016172_030 Hb_011819_020 Hb_011819_020 Hb_065500_020--Hb_011819_020 Hb_021165_010 Hb_021165_010 Hb_065500_020--Hb_021165_010 Hb_008289_040 Hb_008289_040 Hb_065500_020--Hb_008289_040 Hb_060980_010--Hb_016172_030 Hb_027506_010 Hb_027506_010 Hb_060980_010--Hb_027506_010 Hb_019840_030 Hb_019840_030 Hb_060980_010--Hb_019840_030 Hb_000409_050 Hb_000409_050 Hb_060980_010--Hb_000409_050 Hb_000001_170 Hb_000001_170 Hb_060980_010--Hb_000001_170 Hb_004837_280--Hb_000342_050 Hb_002596_060 Hb_002596_060 Hb_004837_280--Hb_002596_060 Hb_107298_010 Hb_107298_010 Hb_004837_280--Hb_107298_010 Hb_001307_240 Hb_001307_240 Hb_004837_280--Hb_001307_240 Hb_000890_070--Hb_002749_060 Hb_000890_070--Hb_004450_070 Hb_004048_120 Hb_004048_120 Hb_000890_070--Hb_004048_120 Hb_003280_020 Hb_003280_020 Hb_000890_070--Hb_003280_020 Hb_003340_010 Hb_003340_010 Hb_000890_070--Hb_003340_010 Hb_002874_110 Hb_002874_110 Hb_000890_070--Hb_002874_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.05237 7.29036 7.86962 11.495 5.40341 4.46258
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.84633 3.23172 4.3984 12.4237 10.4925

CAGE analysis