Hb_000270_710

Information

Type -
Description -
Location Contig270: 581025-583366
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa007344mg
description hypothetical protein
nr
ID XP_012080110.1
description PREDICTED: WAT1-related protein At5g40240-like isoform X1 [Jatropha curcas]
swissprot
ID Q9FL08
description WAT1-related protein At5g40240 OS=Arabidopsis thaliana GN=At5g40240 PE=2 SV=1
trembl
ID A0A067K7Y5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11509 PE=4 SV=1
Gene Ontology
ID GO:0016021
description wat1-related protein at5g40240-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28270: 581036-583421
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000270_710 0.0 - - PREDICTED: WAT1-related protein At5g40240-like isoform X1 [Jatropha curcas]
2 Hb_002320_090 0.1057198066 - - PREDICTED: endoglucanase 25-like [Jatropha curcas]
3 Hb_000696_190 0.1179993545 - - PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1 [Jatropha curcas]
4 Hb_006916_030 0.1188068458 - - PREDICTED: uncharacterized protein LOC105646760 [Jatropha curcas]
5 Hb_000270_830 0.1252736884 - - aldehyde dehydrogenase, putative [Ricinus communis]
6 Hb_035834_010 0.1281766714 - - zinc finger protein, putative [Ricinus communis]
7 Hb_000964_170 0.1300326516 - - Cellulose synthase A catalytic subunit 6 [UDP-forming], putative [Ricinus communis]
8 Hb_000997_290 0.1313954328 - - PREDICTED: acylamino-acid-releasing enzyme [Jatropha curcas]
9 Hb_000445_370 0.1326090054 - - PREDICTED: probable methyltransferase PMT24 [Jatropha curcas]
10 Hb_000977_290 0.1334400692 - - PREDICTED: CMP-sialic acid transporter 2-like isoform X2 [Jatropha curcas]
11 Hb_001269_520 0.1372483366 - - PREDICTED: putative receptor-like protein kinase At1g80870 [Jatropha curcas]
12 Hb_001484_090 0.1415888739 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
13 Hb_001821_060 0.1424541746 - - PREDICTED: C-type lectin receptor-like tyrosine-protein kinase At1g52310 [Jatropha curcas]
14 Hb_000984_140 0.1436909799 - - PREDICTED: xylulose kinase [Jatropha curcas]
15 Hb_000487_370 0.1448975239 - - -
16 Hb_011174_080 0.145150089 - - PREDICTED: sulfite oxidase [Jatropha curcas]
17 Hb_000414_080 0.1457582467 - - PREDICTED: triosephosphate isomerase, chloroplastic [Jatropha curcas]
18 Hb_006816_010 0.1485919352 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001140_180 0.1490431569 - - PREDICTED: transmembrane ascorbate ferrireductase 1 [Jatropha curcas]
20 Hb_001195_370 0.1499990645 - - -

Gene co-expression network

sample Hb_000270_710 Hb_000270_710 Hb_002320_090 Hb_002320_090 Hb_000270_710--Hb_002320_090 Hb_000696_190 Hb_000696_190 Hb_000270_710--Hb_000696_190 Hb_006916_030 Hb_006916_030 Hb_000270_710--Hb_006916_030 Hb_000270_830 Hb_000270_830 Hb_000270_710--Hb_000270_830 Hb_035834_010 Hb_035834_010 Hb_000270_710--Hb_035834_010 Hb_000964_170 Hb_000964_170 Hb_000270_710--Hb_000964_170 Hb_002320_090--Hb_000964_170 Hb_002320_090--Hb_006916_030 Hb_001266_120 Hb_001266_120 Hb_002320_090--Hb_001266_120 Hb_003632_030 Hb_003632_030 Hb_002320_090--Hb_003632_030 Hb_001411_050 Hb_001411_050 Hb_002320_090--Hb_001411_050 Hb_000454_100 Hb_000454_100 Hb_000696_190--Hb_000454_100 Hb_007943_150 Hb_007943_150 Hb_000696_190--Hb_007943_150 Hb_004710_020 Hb_004710_020 Hb_000696_190--Hb_004710_020 Hb_000265_070 Hb_000265_070 Hb_000696_190--Hb_000265_070 Hb_002902_140 Hb_002902_140 Hb_000696_190--Hb_002902_140 Hb_001109_160 Hb_001109_160 Hb_006916_030--Hb_001109_160 Hb_006916_030--Hb_000964_170 Hb_001140_180 Hb_001140_180 Hb_006916_030--Hb_001140_180 Hb_000445_370 Hb_000445_370 Hb_006916_030--Hb_000445_370 Hb_008616_040 Hb_008616_040 Hb_006916_030--Hb_008616_040 Hb_029552_020 Hb_029552_020 Hb_006916_030--Hb_029552_020 Hb_025045_010 Hb_025045_010 Hb_000270_830--Hb_025045_010 Hb_000997_290 Hb_000997_290 Hb_000270_830--Hb_000997_290 Hb_027380_150 Hb_027380_150 Hb_000270_830--Hb_027380_150 Hb_001969_130 Hb_001969_130 Hb_000270_830--Hb_001969_130 Hb_000487_370 Hb_000487_370 Hb_000270_830--Hb_000487_370 Hb_036388_010 Hb_036388_010 Hb_035834_010--Hb_036388_010 Hb_035834_010--Hb_000445_370 Hb_003783_050 Hb_003783_050 Hb_035834_010--Hb_003783_050 Hb_000441_050 Hb_000441_050 Hb_035834_010--Hb_000441_050 Hb_004242_170 Hb_004242_170 Hb_035834_010--Hb_004242_170 Hb_000120_740 Hb_000120_740 Hb_035834_010--Hb_000120_740 Hb_000964_170--Hb_000445_370 Hb_000964_170--Hb_001411_050 Hb_000964_170--Hb_001140_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.0215 14.1996 26.1055 33.5759 7.96231 8.337
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.5483 1.42031 0.971403 23.8647 52.2437

CAGE analysis