Hb_189003_070

Information

Type -
Description -
Location Contig189003: 31700-33592
Sequence    

Annotation

kegg
ID rcu:RCOM_0105720
description Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A, putative (EC:3.5.1.52)
nr
ID XP_012075806.1
description PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Jatropha curcas]
swissprot
ID P81898
description Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A OS=Prunus dulcis PE=1 SV=2
trembl
ID A0A067KF92
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10547 PE=4 SV=1
Gene Ontology
ID GO:0005774
description peptide-n4-(n-acetyl-beta-glucosaminyl)asparagine amidase a-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_189003_070 0.0 - - PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Jatropha curcas]
2 Hb_006615_230 0.0776442542 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
3 Hb_006736_050 0.1000208675 - - hypothetical protein POPTR_0006s04450g [Populus trichocarpa]
4 Hb_134014_010 0.100842363 - - PREDICTED: testis-expressed sequence 10 protein isoform X2 [Jatropha curcas]
5 Hb_036388_010 0.1101449894 - - PREDICTED: formate--tetrahydrofolate ligase [Populus euphratica]
6 Hb_000417_380 0.1102735225 - - SecY protein transport family protein [Theobroma cacao]
7 Hb_001119_070 0.115379421 - - methylenetetrahydrofolate reductase, putative [Ricinus communis]
8 Hb_002495_030 0.1185619549 - - PREDICTED: serine/threonine-protein kinase Nek6 isoform X2 [Jatropha curcas]
9 Hb_000120_740 0.1228949239 desease resistance Gene Name: VARLMGL conserved hypothetical protein [Ricinus communis]
10 Hb_004522_030 0.1241188455 - - PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 3 [Jatropha curcas]
11 Hb_012807_150 0.1243321797 - - PREDICTED: alpha-L-fucosidase 1 [Jatropha curcas]
12 Hb_000327_360 0.124970371 - - unnamed protein product [Coffea canephora]
13 Hb_158092_040 0.1257436298 - - PREDICTED: uncharacterized protein LOC105647294 [Jatropha curcas]
14 Hb_010050_020 0.1260396351 - - PREDICTED: uncharacterized protein LOC102601222 [Solanum tuberosum]
15 Hb_098795_030 0.1268420843 - - PREDICTED: metal tolerance protein 1-like [Vitis vinifera]
16 Hb_006570_090 0.1313496052 - - tubulin beta chain, putative [Ricinus communis]
17 Hb_000603_020 0.1317222753 - - PREDICTED: uncharacterized protein LOC105638063 isoform X1 [Jatropha curcas]
18 Hb_003001_130 0.1331856033 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000283_140 0.1333338486 - - PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Jatropha curcas]
20 Hb_022693_110 0.135985775 - - phosphate transporter [Manihot esculenta]

Gene co-expression network

sample Hb_189003_070 Hb_189003_070 Hb_006615_230 Hb_006615_230 Hb_189003_070--Hb_006615_230 Hb_006736_050 Hb_006736_050 Hb_189003_070--Hb_006736_050 Hb_134014_010 Hb_134014_010 Hb_189003_070--Hb_134014_010 Hb_036388_010 Hb_036388_010 Hb_189003_070--Hb_036388_010 Hb_000417_380 Hb_000417_380 Hb_189003_070--Hb_000417_380 Hb_001119_070 Hb_001119_070 Hb_189003_070--Hb_001119_070 Hb_006615_230--Hb_134014_010 Hb_098795_030 Hb_098795_030 Hb_006615_230--Hb_098795_030 Hb_006615_230--Hb_001119_070 Hb_158092_040 Hb_158092_040 Hb_006615_230--Hb_158092_040 Hb_002495_030 Hb_002495_030 Hb_006615_230--Hb_002495_030 Hb_006736_050--Hb_036388_010 Hb_006120_060 Hb_006120_060 Hb_006736_050--Hb_006120_060 Hb_000768_150 Hb_000768_150 Hb_006736_050--Hb_000768_150 Hb_000120_740 Hb_000120_740 Hb_006736_050--Hb_000120_740 Hb_000283_140 Hb_000283_140 Hb_006736_050--Hb_000283_140 Hb_000959_130 Hb_000959_130 Hb_134014_010--Hb_000959_130 Hb_012395_050 Hb_012395_050 Hb_134014_010--Hb_012395_050 Hb_029223_040 Hb_029223_040 Hb_134014_010--Hb_029223_040 Hb_134014_010--Hb_158092_040 Hb_036388_010--Hb_000768_150 Hb_035834_010 Hb_035834_010 Hb_036388_010--Hb_035834_010 Hb_003783_050 Hb_003783_050 Hb_036388_010--Hb_003783_050 Hb_000997_320 Hb_000997_320 Hb_036388_010--Hb_000997_320 Hb_036388_010--Hb_000417_380 Hb_000580_110 Hb_000580_110 Hb_000417_380--Hb_000580_110 Hb_000236_180 Hb_000236_180 Hb_000417_380--Hb_000236_180 Hb_000077_310 Hb_000077_310 Hb_000417_380--Hb_000077_310 Hb_000417_380--Hb_003783_050 Hb_006351_020 Hb_006351_020 Hb_001119_070--Hb_006351_020 Hb_001119_070--Hb_158092_040 Hb_000806_130 Hb_000806_130 Hb_001119_070--Hb_000806_130 Hb_000696_070 Hb_000696_070 Hb_001119_070--Hb_000696_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.3205 8.10275 17.992 40.5033 0.984949 1.88493
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.08733 1.0005 2.35902 13.6836 24.4943

CAGE analysis