Hb_006120_060

Information

Type -
Description -
Location Contig6120: 29478-34600
Sequence    

Annotation

kegg
ID tcc:TCM_021415
description O-acetyltransferase family protein isoform 1
nr
ID XP_007035864.1
description O-acetyltransferase family protein isoform 1 [Theobroma cacao]
swissprot
ID -
description -
trembl
ID A0A061EP41
description O-acetyltransferase family protein isoform 1 OS=Theobroma cacao GN=TCM_021415 PE=4 SV=1
Gene Ontology
ID GO:0012505
description o-acetyltransferase family protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51034: 29503-30258 , PASA_asmbl_51035: 29438-34513 , PASA_asmbl_51036: 33483-34649
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006120_060 0.0 - - O-acetyltransferase family protein isoform 1 [Theobroma cacao]
2 Hb_012807_150 0.0851837312 - - PREDICTED: alpha-L-fucosidase 1 [Jatropha curcas]
3 Hb_000622_330 0.097835056 - - PREDICTED: uncharacterized protein LOC105642906 [Jatropha curcas]
4 Hb_000689_050 0.1007564386 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000638_060 0.1016588483 - - PREDICTED: probable methyltransferase PMT26 [Jatropha curcas]
6 Hb_000283_140 0.1019818865 - - PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Jatropha curcas]
7 Hb_010050_020 0.1034963983 - - PREDICTED: uncharacterized protein LOC102601222 [Solanum tuberosum]
8 Hb_000327_360 0.1035017463 - - unnamed protein product [Coffea canephora]
9 Hb_007101_260 0.1079056588 - - altered response to gravity (arg1), plant, putative [Ricinus communis]
10 Hb_003847_040 0.1100519958 - - adenosine diphosphatase, putative [Ricinus communis]
11 Hb_005074_040 0.1135051494 - - ATP binding protein, putative [Ricinus communis]
12 Hb_004545_080 0.1153257034 - - protein with unknown function [Ricinus communis]
13 Hb_003740_020 0.1155276545 - - PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial isoform X2 [Jatropha curcas]
14 Hb_021409_070 0.116876521 - - PREDICTED: transcription factor bHLH157 isoform X1 [Jatropha curcas]
15 Hb_005357_110 0.1180951352 - - hypothetical protein B456_002G083000 [Gossypium raimondii]
16 Hb_006736_050 0.1181737315 - - hypothetical protein POPTR_0006s04450g [Populus trichocarpa]
17 Hb_001195_660 0.1210078732 - - metalloendopeptidase, putative [Ricinus communis]
18 Hb_000414_080 0.1213915089 - - PREDICTED: triosephosphate isomerase, chloroplastic [Jatropha curcas]
19 Hb_000422_080 0.1221045171 transcription factor TF Family: E2F-DP PREDICTED: transcription factor E2FB isoform X1 [Jatropha curcas]
20 Hb_002217_080 0.1222442141 - - PREDICTED: probable beta-1,3-galactosyltransferase 16 [Jatropha curcas]

Gene co-expression network

sample Hb_006120_060 Hb_006120_060 Hb_012807_150 Hb_012807_150 Hb_006120_060--Hb_012807_150 Hb_000622_330 Hb_000622_330 Hb_006120_060--Hb_000622_330 Hb_000689_050 Hb_000689_050 Hb_006120_060--Hb_000689_050 Hb_000638_060 Hb_000638_060 Hb_006120_060--Hb_000638_060 Hb_000283_140 Hb_000283_140 Hb_006120_060--Hb_000283_140 Hb_010050_020 Hb_010050_020 Hb_006120_060--Hb_010050_020 Hb_012807_150--Hb_000283_140 Hb_000271_220 Hb_000271_220 Hb_012807_150--Hb_000271_220 Hb_000603_020 Hb_000603_020 Hb_012807_150--Hb_000603_020 Hb_000327_360 Hb_000327_360 Hb_012807_150--Hb_000327_360 Hb_012807_150--Hb_000638_060 Hb_000622_330--Hb_010050_020 Hb_000928_120 Hb_000928_120 Hb_000622_330--Hb_000928_120 Hb_002217_080 Hb_002217_080 Hb_000622_330--Hb_002217_080 Hb_000000_480 Hb_000000_480 Hb_000622_330--Hb_000000_480 Hb_004522_030 Hb_004522_030 Hb_000622_330--Hb_004522_030 Hb_003050_360 Hb_003050_360 Hb_000689_050--Hb_003050_360 Hb_005074_040 Hb_005074_040 Hb_000689_050--Hb_005074_040 Hb_014497_010 Hb_014497_010 Hb_000689_050--Hb_014497_010 Hb_000996_080 Hb_000996_080 Hb_000689_050--Hb_000996_080 Hb_004545_080 Hb_004545_080 Hb_000689_050--Hb_004545_080 Hb_003847_040 Hb_003847_040 Hb_000638_060--Hb_003847_040 Hb_000638_060--Hb_000283_140 Hb_002217_320 Hb_002217_320 Hb_000638_060--Hb_002217_320 Hb_000570_020 Hb_000570_020 Hb_000638_060--Hb_000570_020 Hb_004943_040 Hb_004943_040 Hb_000283_140--Hb_004943_040 Hb_000283_140--Hb_000570_020 Hb_000283_140--Hb_000928_120 Hb_000283_140--Hb_000271_220 Hb_012760_090 Hb_012760_090 Hb_010050_020--Hb_012760_090 Hb_001221_390 Hb_001221_390 Hb_010050_020--Hb_001221_390 Hb_002641_160 Hb_002641_160 Hb_010050_020--Hb_002641_160 Hb_010050_020--Hb_004522_030 Hb_000012_400 Hb_000012_400 Hb_010050_020--Hb_000012_400
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.57446 3.82194 10.8748 14.7832 1.77081 0.848081
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.33837 1.50894 0.986367 4.25433 9.72934

CAGE analysis