Hb_000622_330

Information

Type -
Description -
Location Contig622: 266488-274700
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa000692mg
description hypothetical protein
nr
ID XP_012083283.1
description PREDICTED: uncharacterized protein LOC105642906 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JXC8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14313 PE=4 SV=1
Gene Ontology
ID GO:0005768
description glycosyltransferase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51587: 266731-273765
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000622_330 0.0 - - PREDICTED: uncharacterized protein LOC105642906 [Jatropha curcas]
2 Hb_010050_020 0.0932532024 - - PREDICTED: uncharacterized protein LOC102601222 [Solanum tuberosum]
3 Hb_000928_120 0.093888245 - - PREDICTED: benzyl alcohol O-benzoyltransferase-like [Jatropha curcas]
4 Hb_006120_060 0.097835056 - - O-acetyltransferase family protein isoform 1 [Theobroma cacao]
5 Hb_002217_080 0.1039811545 - - PREDICTED: probable beta-1,3-galactosyltransferase 16 [Jatropha curcas]
6 Hb_000000_480 0.1061027637 - - PREDICTED: deSI-like protein At4g17486 isoform X1 [Jatropha curcas]
7 Hb_004522_030 0.1072523115 - - PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 3 [Jatropha curcas]
8 Hb_000283_140 0.1072685934 - - PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Jatropha curcas]
9 Hb_004218_130 0.111391801 - - PREDICTED: uridine 5'-monophosphate synthase [Jatropha curcas]
10 Hb_000638_060 0.1120902231 - - PREDICTED: probable methyltransferase PMT26 [Jatropha curcas]
11 Hb_002325_060 0.1149058118 - - PREDICTED: ADP-ribosylation factor-like protein 8B-like [Glycine max]
12 Hb_000853_330 0.1160410158 - - PREDICTED: importin subunit alpha-like [Jatropha curcas]
13 Hb_003001_130 0.1206549663 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002110_170 0.1215747782 - - hypothetical protein CICLE_v10002406mg [Citrus clementina]
15 Hb_000570_020 0.1221327948 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9H isoform X1 [Jatropha curcas]
16 Hb_000392_250 0.1236800936 - - PREDICTED: HVA22-like protein a [Jatropha curcas]
17 Hb_012760_090 0.1259977105 - - Aspartic proteinase-like protein 1 [Morus notabilis]
18 Hb_003849_120 0.126725091 - - PREDICTED: uncharacterized protein LOC100264440 [Vitis vinifera]
19 Hb_012807_150 0.1283380012 - - PREDICTED: alpha-L-fucosidase 1 [Jatropha curcas]
20 Hb_000424_030 0.1283641184 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000622_330 Hb_000622_330 Hb_010050_020 Hb_010050_020 Hb_000622_330--Hb_010050_020 Hb_000928_120 Hb_000928_120 Hb_000622_330--Hb_000928_120 Hb_006120_060 Hb_006120_060 Hb_000622_330--Hb_006120_060 Hb_002217_080 Hb_002217_080 Hb_000622_330--Hb_002217_080 Hb_000000_480 Hb_000000_480 Hb_000622_330--Hb_000000_480 Hb_004522_030 Hb_004522_030 Hb_000622_330--Hb_004522_030 Hb_012760_090 Hb_012760_090 Hb_010050_020--Hb_012760_090 Hb_001221_390 Hb_001221_390 Hb_010050_020--Hb_001221_390 Hb_002641_160 Hb_002641_160 Hb_010050_020--Hb_002641_160 Hb_010050_020--Hb_004522_030 Hb_000012_400 Hb_000012_400 Hb_010050_020--Hb_000012_400 Hb_000928_120--Hb_004522_030 Hb_000283_140 Hb_000283_140 Hb_000928_120--Hb_000283_140 Hb_003001_130 Hb_003001_130 Hb_000928_120--Hb_003001_130 Hb_000570_020 Hb_000570_020 Hb_000928_120--Hb_000570_020 Hb_007537_030 Hb_007537_030 Hb_000928_120--Hb_007537_030 Hb_012807_150 Hb_012807_150 Hb_006120_060--Hb_012807_150 Hb_000689_050 Hb_000689_050 Hb_006120_060--Hb_000689_050 Hb_000638_060 Hb_000638_060 Hb_006120_060--Hb_000638_060 Hb_006120_060--Hb_000283_140 Hb_006120_060--Hb_010050_020 Hb_002942_230 Hb_002942_230 Hb_002217_080--Hb_002942_230 Hb_001411_130 Hb_001411_130 Hb_002217_080--Hb_001411_130 Hb_000418_020 Hb_000418_020 Hb_002217_080--Hb_000418_020 Hb_002687_200 Hb_002687_200 Hb_002217_080--Hb_002687_200 Hb_000866_070 Hb_000866_070 Hb_002217_080--Hb_000866_070 Hb_004218_130 Hb_004218_130 Hb_000000_480--Hb_004218_130 Hb_012762_040 Hb_012762_040 Hb_000000_480--Hb_012762_040 Hb_000098_180 Hb_000098_180 Hb_000000_480--Hb_000098_180 Hb_000000_480--Hb_000928_120 Hb_029253_010 Hb_029253_010 Hb_000000_480--Hb_029253_010 Hb_004522_030--Hb_007537_030 Hb_004522_030--Hb_003001_130 Hb_034507_060 Hb_034507_060 Hb_004522_030--Hb_034507_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.684788 5.22843 8.0893 13.3287 1.69646 1.0244
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.24215 1.90565 0.719271 4.41813 6.82046

CAGE analysis