Hb_000012_400

Information

Type -
Description -
Location Contig12: 571154-581558
Sequence    

Annotation

kegg
ID tcc:TCM_037277
description K+ efflux antiporter 4
nr
ID XP_012077301.1
description PREDICTED: K(+) efflux antiporter 6 [Jatropha curcas]
swissprot
ID Q9ZUN3
description K(+) efflux antiporter 4 OS=Arabidopsis thaliana GN=KEA4 PE=2 SV=2
trembl
ID A0A067KGH2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07679 PE=4 SV=1
Gene Ontology
ID GO:0016021
description k(+) efflux antiporter 6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06031: 571174-581515 , PASA_asmbl_06032: 573536-573647
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000012_400 0.0 - - PREDICTED: K(+) efflux antiporter 6 [Jatropha curcas]
2 Hb_003849_120 0.0972487294 - - PREDICTED: uncharacterized protein LOC100264440 [Vitis vinifera]
3 Hb_010050_020 0.1001850942 - - PREDICTED: uncharacterized protein LOC102601222 [Solanum tuberosum]
4 Hb_010407_030 0.1019245014 - - PREDICTED: casein kinase I-like [Jatropha curcas]
5 Hb_000562_100 0.1054260033 - - PREDICTED: protein IQ-DOMAIN 32 [Jatropha curcas]
6 Hb_001195_310 0.1082369706 - - ATP binding protein, putative [Ricinus communis]
7 Hb_001009_150 0.1082967233 - - Glyceraldehyde-3-phosphate dehydrogenase [Gossypium arboreum]
8 Hb_000997_070 0.1117495358 - - PREDICTED: ureidoglycolate hydrolase isoform X1 [Jatropha curcas]
9 Hb_000196_010 0.1125601035 - - Patellin-5, putative [Ricinus communis]
10 Hb_003929_190 0.116184396 - - PREDICTED: probable receptor-like protein kinase At5g18500 [Jatropha curcas]
11 Hb_001195_420 0.1161890105 - - PREDICTED: uncharacterized protein LOC105633774 isoform X4 [Jatropha curcas]
12 Hb_001221_390 0.1171634765 - - Phospholipase C 4 precursor, putative [Ricinus communis]
13 Hb_000167_040 0.1236879668 - - PREDICTED: serine carboxypeptidase-like [Jatropha curcas]
14 Hb_000363_180 0.1237565544 - - PREDICTED: uncharacterized protein LOC105633052 [Jatropha curcas]
15 Hb_006949_060 0.1268259668 - - PREDICTED: aminopeptidase M1-like [Jatropha curcas]
16 Hb_020586_010 0.1321239606 - - Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis]
17 Hb_002316_170 0.1326926497 - - purine permease, putative [Ricinus communis]
18 Hb_002539_050 0.1332283985 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Jatropha curcas]
19 Hb_010381_020 0.1343676037 - - Endosomal P24A protein precursor, putative [Ricinus communis]
20 Hb_014497_040 0.1345701613 - - PREDICTED: calvin cycle protein CP12-3, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000012_400 Hb_000012_400 Hb_003849_120 Hb_003849_120 Hb_000012_400--Hb_003849_120 Hb_010050_020 Hb_010050_020 Hb_000012_400--Hb_010050_020 Hb_010407_030 Hb_010407_030 Hb_000012_400--Hb_010407_030 Hb_000562_100 Hb_000562_100 Hb_000012_400--Hb_000562_100 Hb_001195_310 Hb_001195_310 Hb_000012_400--Hb_001195_310 Hb_001009_150 Hb_001009_150 Hb_000012_400--Hb_001009_150 Hb_003849_120--Hb_000562_100 Hb_000997_070 Hb_000997_070 Hb_003849_120--Hb_000997_070 Hb_002217_080 Hb_002217_080 Hb_003849_120--Hb_002217_080 Hb_000968_060 Hb_000968_060 Hb_003849_120--Hb_000968_060 Hb_009078_020 Hb_009078_020 Hb_003849_120--Hb_009078_020 Hb_012760_090 Hb_012760_090 Hb_010050_020--Hb_012760_090 Hb_001221_390 Hb_001221_390 Hb_010050_020--Hb_001221_390 Hb_000622_330 Hb_000622_330 Hb_010050_020--Hb_000622_330 Hb_002641_160 Hb_002641_160 Hb_010050_020--Hb_002641_160 Hb_004522_030 Hb_004522_030 Hb_010050_020--Hb_004522_030 Hb_006949_060 Hb_006949_060 Hb_010407_030--Hb_006949_060 Hb_010381_020 Hb_010381_020 Hb_010407_030--Hb_010381_020 Hb_002739_120 Hb_002739_120 Hb_010407_030--Hb_002739_120 Hb_010407_030--Hb_001009_150 Hb_005854_040 Hb_005854_040 Hb_010407_030--Hb_005854_040 Hb_010407_030--Hb_009078_020 Hb_012353_040 Hb_012353_040 Hb_000562_100--Hb_012353_040 Hb_000562_100--Hb_000997_070 Hb_004052_180 Hb_004052_180 Hb_000562_100--Hb_004052_180 Hb_000866_070 Hb_000866_070 Hb_000562_100--Hb_000866_070 Hb_000167_040 Hb_000167_040 Hb_001195_310--Hb_000167_040 Hb_001969_140 Hb_001969_140 Hb_001195_310--Hb_001969_140 Hb_000679_040 Hb_000679_040 Hb_001195_310--Hb_000679_040 Hb_020586_010 Hb_020586_010 Hb_001195_310--Hb_020586_010 Hb_001195_310--Hb_000997_070 Hb_011310_050 Hb_011310_050 Hb_001195_310--Hb_011310_050 Hb_001009_150--Hb_002739_120 Hb_001195_420 Hb_001195_420 Hb_001009_150--Hb_001195_420 Hb_000318_040 Hb_000318_040 Hb_001009_150--Hb_000318_040 Hb_001009_150--Hb_006949_060 Hb_028077_020 Hb_028077_020 Hb_001009_150--Hb_028077_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.51639 14.1265 17.5821 36.2986 6.14679 5.27807
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.72438 1.7456 0.932301 14.3234 18.4482

CAGE analysis