Hb_010407_030

Information

Type -
Description -
Location Contig10407: 33829-41464
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa005419mg
description hypothetical protein
nr
ID XP_012069858.1
description PREDICTED: casein kinase I-like [Jatropha curcas]
swissprot
ID P42158
description Casein kinase I isoform delta-like OS=Arabidopsis thaliana GN=At4g26100 PE=2 SV=2
trembl
ID A0A067KZF1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02346 PE=3 SV=1
Gene Ontology
ID GO:0004674
description casein kinase i-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01498: 33835-41467
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010407_030 0.0 - - PREDICTED: casein kinase I-like [Jatropha curcas]
2 Hb_006949_060 0.06854752 - - PREDICTED: aminopeptidase M1-like [Jatropha curcas]
3 Hb_010381_020 0.0818877727 - - Endosomal P24A protein precursor, putative [Ricinus communis]
4 Hb_002739_120 0.0851986203 - - PREDICTED: zinc finger protein ZPR1-like [Jatropha curcas]
5 Hb_001009_150 0.0911678378 - - Glyceraldehyde-3-phosphate dehydrogenase [Gossypium arboreum]
6 Hb_005854_040 0.0919402632 - - conserved hypothetical protein [Ricinus communis]
7 Hb_009078_020 0.092369563 - - PREDICTED: CDPK-related kinase 7-like [Populus euphratica]
8 Hb_021977_010 0.0930751138 - - PREDICTED: leukotriene A-4 hydrolase homolog [Jatropha curcas]
9 Hb_001059_060 0.1000322221 - - PREDICTED: bifunctional riboflavin kinase/FMN phosphatase [Jatropha curcas]
10 Hb_001702_050 0.1001887303 - - PREDICTED: probable protein S-acyltransferase 19 isoform X1 [Jatropha curcas]
11 Hb_000227_320 0.1002530286 - - unnamed protein product [Vitis vinifera]
12 Hb_000984_140 0.1006544521 - - PREDICTED: xylulose kinase [Jatropha curcas]
13 Hb_000012_400 0.1019245014 - - PREDICTED: K(+) efflux antiporter 6 [Jatropha curcas]
14 Hb_000853_330 0.1028086481 - - PREDICTED: importin subunit alpha-like [Jatropha curcas]
15 Hb_001414_010 0.1037366847 transcription factor TF Family: ARR-B two-component sensor histidine kinase bacteria, putative [Ricinus communis]
16 Hb_102763_010 0.104984576 - - PREDICTED: heat shock cognate protein 80 [Jatropha curcas]
17 Hb_002316_170 0.1067203595 - - purine permease, putative [Ricinus communis]
18 Hb_000418_020 0.1067684743 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
19 Hb_000027_200 0.1076255784 - - PREDICTED: uncharacterized protein LOC105642055 [Jatropha curcas]
20 Hb_011174_080 0.1093692001 - - PREDICTED: sulfite oxidase [Jatropha curcas]

Gene co-expression network

sample Hb_010407_030 Hb_010407_030 Hb_006949_060 Hb_006949_060 Hb_010407_030--Hb_006949_060 Hb_010381_020 Hb_010381_020 Hb_010407_030--Hb_010381_020 Hb_002739_120 Hb_002739_120 Hb_010407_030--Hb_002739_120 Hb_001009_150 Hb_001009_150 Hb_010407_030--Hb_001009_150 Hb_005854_040 Hb_005854_040 Hb_010407_030--Hb_005854_040 Hb_009078_020 Hb_009078_020 Hb_010407_030--Hb_009078_020 Hb_000227_320 Hb_000227_320 Hb_006949_060--Hb_000227_320 Hb_132840_030 Hb_132840_030 Hb_006949_060--Hb_132840_030 Hb_000950_040 Hb_000950_040 Hb_006949_060--Hb_000950_040 Hb_006949_060--Hb_001009_150 Hb_002316_170 Hb_002316_170 Hb_006949_060--Hb_002316_170 Hb_102763_010 Hb_102763_010 Hb_010381_020--Hb_102763_010 Hb_005000_090 Hb_005000_090 Hb_010381_020--Hb_005000_090 Hb_000167_040 Hb_000167_040 Hb_010381_020--Hb_000167_040 Hb_000997_070 Hb_000997_070 Hb_010381_020--Hb_000997_070 Hb_002311_130 Hb_002311_130 Hb_010381_020--Hb_002311_130 Hb_001250_050 Hb_001250_050 Hb_002739_120--Hb_001250_050 Hb_001085_080 Hb_001085_080 Hb_002739_120--Hb_001085_080 Hb_003777_030 Hb_003777_030 Hb_002739_120--Hb_003777_030 Hb_000418_020 Hb_000418_020 Hb_002739_120--Hb_000418_020 Hb_000197_180 Hb_000197_180 Hb_002739_120--Hb_000197_180 Hb_002739_120--Hb_001009_150 Hb_001195_420 Hb_001195_420 Hb_001009_150--Hb_001195_420 Hb_000318_040 Hb_000318_040 Hb_001009_150--Hb_000318_040 Hb_028077_020 Hb_028077_020 Hb_001009_150--Hb_028077_020 Hb_000027_200 Hb_000027_200 Hb_005854_040--Hb_000027_200 Hb_007317_020 Hb_007317_020 Hb_005854_040--Hb_007317_020 Hb_002687_200 Hb_002687_200 Hb_005854_040--Hb_002687_200 Hb_021977_010 Hb_021977_010 Hb_005854_040--Hb_021977_010 Hb_001226_130 Hb_001226_130 Hb_005854_040--Hb_001226_130 Hb_015884_020 Hb_015884_020 Hb_005854_040--Hb_015884_020 Hb_001059_060 Hb_001059_060 Hb_009078_020--Hb_001059_060 Hb_011188_010 Hb_011188_010 Hb_009078_020--Hb_011188_010 Hb_001998_210 Hb_001998_210 Hb_009078_020--Hb_001998_210 Hb_002809_160 Hb_002809_160 Hb_009078_020--Hb_002809_160 Hb_001408_020 Hb_001408_020 Hb_009078_020--Hb_001408_020 Hb_000853_330 Hb_000853_330 Hb_009078_020--Hb_000853_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.42925 17.1593 18.0228 29.2047 4.89552 6.70416
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.79878 3.00403 2.60478 18.4279 20.0122

CAGE analysis