Hb_102763_010

Information

Type -
Description -
Location Contig102763: 7205-9322
Sequence    

Annotation

kegg
ID vvi:100246843
description heat shock cognate protein 80
nr
ID XP_012078471.1
description PREDICTED: heat shock cognate protein 80 [Jatropha curcas]
swissprot
ID P36181
description Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1
trembl
ID A0A067KC64
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13163 PE=3 SV=1
Gene Ontology
ID GO:0005524
description heat shock cognate protein 80

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01135: 6948-10243
cDNA
(Sanger)
(ID:Location)		 007_P16.ab1: 8658-10243 , 043_G18.ab1: 8023-8794 , 045_F10.ab1: 8640-10243

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_102763_010 0.0 - - PREDICTED: heat shock cognate protein 80 [Jatropha curcas]
2 Hb_010381_020 0.0489470571 - - Endosomal P24A protein precursor, putative [Ricinus communis]
3 Hb_005000_090 0.0723930611 - - PREDICTED: venom phosphodiesterase 2 [Jatropha curcas]
4 Hb_001998_220 0.0840782827 - - PREDICTED: isoamylase 1, chloroplastic [Jatropha curcas]
5 Hb_002311_130 0.0964555058 - - PREDICTED: importin subunit alpha-2 isoform X2 [Jatropha curcas]
6 Hb_000019_170 0.0983511922 - - PREDICTED: alpha-mannosidase [Jatropha curcas]
7 Hb_002805_090 0.1019989408 - - Ran GTPase binding protein, putative [Ricinus communis]
8 Hb_002072_010 0.102768747 - - conserved hypothetical protein [Ricinus communis]
9 Hb_010407_030 0.104984576 - - PREDICTED: casein kinase I-like [Jatropha curcas]
10 Hb_001702_050 0.1055086882 - - PREDICTED: probable protein S-acyltransferase 19 isoform X1 [Jatropha curcas]
11 Hb_021977_010 0.111413857 - - PREDICTED: leukotriene A-4 hydrolase homolog [Jatropha curcas]
12 Hb_001430_100 0.1129938707 - - cytochrome P450, putative [Ricinus communis]
13 Hb_009476_120 0.1132728673 - - Clathrin heavy chain 1 [Glycine soja]
14 Hb_005854_040 0.1151260785 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000066_040 0.1154032731 - - PREDICTED: CDPK-related kinase 7-like [Populus euphratica]
16 Hb_003125_180 0.1161695991 - - hypothetical protein JCGZ_26440 [Jatropha curcas]
17 Hb_001235_130 0.1161704505 - - -
18 Hb_001446_060 0.1166175711 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
19 Hb_000492_080 0.1185842411 - - PREDICTED: probable sucrose-phosphate synthase 1 [Jatropha curcas]
20 Hb_000473_120 0.1187125891 - - hypothetical protein JCGZ_16177 [Jatropha curcas]

Gene co-expression network

sample Hb_102763_010 Hb_102763_010 Hb_010381_020 Hb_010381_020 Hb_102763_010--Hb_010381_020 Hb_005000_090 Hb_005000_090 Hb_102763_010--Hb_005000_090 Hb_001998_220 Hb_001998_220 Hb_102763_010--Hb_001998_220 Hb_002311_130 Hb_002311_130 Hb_102763_010--Hb_002311_130 Hb_000019_170 Hb_000019_170 Hb_102763_010--Hb_000019_170 Hb_002805_090 Hb_002805_090 Hb_102763_010--Hb_002805_090 Hb_010407_030 Hb_010407_030 Hb_010381_020--Hb_010407_030 Hb_010381_020--Hb_005000_090 Hb_000167_040 Hb_000167_040 Hb_010381_020--Hb_000167_040 Hb_000997_070 Hb_000997_070 Hb_010381_020--Hb_000997_070 Hb_010381_020--Hb_002311_130 Hb_001366_270 Hb_001366_270 Hb_005000_090--Hb_001366_270 Hb_009476_120 Hb_009476_120 Hb_005000_090--Hb_009476_120 Hb_005000_090--Hb_001998_220 Hb_000492_080 Hb_000492_080 Hb_005000_090--Hb_000492_080 Hb_000674_010 Hb_000674_010 Hb_005000_090--Hb_000674_010 Hb_001702_050 Hb_001702_050 Hb_001998_220--Hb_001702_050 Hb_021977_010 Hb_021977_010 Hb_001998_220--Hb_021977_010 Hb_000809_250 Hb_000809_250 Hb_001998_220--Hb_000809_250 Hb_001414_010 Hb_001414_010 Hb_001998_220--Hb_001414_010 Hb_002311_130--Hb_002805_090 Hb_002400_060 Hb_002400_060 Hb_002311_130--Hb_002400_060 Hb_007313_040 Hb_007313_040 Hb_002311_130--Hb_007313_040 Hb_002311_130--Hb_001998_220 Hb_001473_170 Hb_001473_170 Hb_002311_130--Hb_001473_170 Hb_002311_130--Hb_005000_090 Hb_003125_180 Hb_003125_180 Hb_000019_170--Hb_003125_180 Hb_003058_200 Hb_003058_200 Hb_000019_170--Hb_003058_200 Hb_002072_010 Hb_002072_010 Hb_000019_170--Hb_002072_010 Hb_000823_010 Hb_000823_010 Hb_000019_170--Hb_000823_010 Hb_000157_070 Hb_000157_070 Hb_000019_170--Hb_000157_070 Hb_005116_140 Hb_005116_140 Hb_002805_090--Hb_005116_140 Hb_000066_040 Hb_000066_040 Hb_002805_090--Hb_000066_040 Hb_002805_090--Hb_001998_220 Hb_000025_500 Hb_000025_500 Hb_002805_090--Hb_000025_500 Hb_011174_080 Hb_011174_080 Hb_002805_090--Hb_011174_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
65.5281 351.155 228.45 494.373 144.469 122.668
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
33.8678 51.3715 78.339 366.705 481.175

CAGE analysis