Hb_006949_060

Information

Type -
Description -
Location Contig6949: 35384-41364
Sequence    

Annotation

kegg
ID rcu:RCOM_0706340
description puromycin-sensitive aminopeptidase, putative (EC:3.4.11.2)
nr
ID XP_012077233.1
description PREDICTED: aminopeptidase M1-like [Jatropha curcas]
swissprot
ID Q6Z6L4
description Aminopeptidase M1-A OS=Oryza sativa subsp. japonica GN=Os02g0218200 PE=2 SV=1
trembl
ID A0A067KP44
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07636 PE=4 SV=1
Gene Ontology
ID GO:0044464
description aminopeptidase m1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006949_060 0.0 - - PREDICTED: aminopeptidase M1-like [Jatropha curcas]
2 Hb_010407_030 0.06854752 - - PREDICTED: casein kinase I-like [Jatropha curcas]
3 Hb_000227_320 0.0861794346 - - unnamed protein product [Vitis vinifera]
4 Hb_132840_030 0.0943293851 transcription factor TF Family: MYB-related lhy1 [Populus tremula]
5 Hb_000950_040 0.0951708301 - - cation-transporting atpase plant, putative [Ricinus communis]
6 Hb_001009_150 0.0995443354 - - Glyceraldehyde-3-phosphate dehydrogenase [Gossypium arboreum]
7 Hb_002316_170 0.1001402128 - - purine permease, putative [Ricinus communis]
8 Hb_000853_330 0.1032471649 - - PREDICTED: importin subunit alpha-like [Jatropha curcas]
9 Hb_001059_060 0.1083049771 - - PREDICTED: bifunctional riboflavin kinase/FMN phosphatase [Jatropha curcas]
10 Hb_009078_020 0.1102258222 - - PREDICTED: CDPK-related kinase 7-like [Populus euphratica]
11 Hb_000072_020 0.1131895348 - - PREDICTED: C2 and GRAM domain-containing protein At1g03370 isoform X2 [Jatropha curcas]
12 Hb_000196_010 0.1136829298 - - Patellin-5, putative [Ricinus communis]
13 Hb_002739_120 0.1149193593 - - PREDICTED: zinc finger protein ZPR1-like [Jatropha curcas]
14 Hb_000261_310 0.1163142926 - - PREDICTED: UV radiation resistance-associated gene protein isoform X3 [Jatropha curcas]
15 Hb_002849_070 0.1165931708 - - PREDICTED: protein BPS1, chloroplastic [Jatropha curcas]
16 Hb_000220_080 0.1172632177 - - kinase, putative [Ricinus communis]
17 Hb_010381_020 0.1179575927 - - Endosomal P24A protein precursor, putative [Ricinus communis]
18 Hb_033363_010 0.1184275253 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 8 [Jatropha curcas]
19 Hb_010050_020 0.1204210268 - - PREDICTED: uncharacterized protein LOC102601222 [Solanum tuberosum]
20 Hb_000363_180 0.1215155943 - - PREDICTED: uncharacterized protein LOC105633052 [Jatropha curcas]

Gene co-expression network

sample Hb_006949_060 Hb_006949_060 Hb_010407_030 Hb_010407_030 Hb_006949_060--Hb_010407_030 Hb_000227_320 Hb_000227_320 Hb_006949_060--Hb_000227_320 Hb_132840_030 Hb_132840_030 Hb_006949_060--Hb_132840_030 Hb_000950_040 Hb_000950_040 Hb_006949_060--Hb_000950_040 Hb_001009_150 Hb_001009_150 Hb_006949_060--Hb_001009_150 Hb_002316_170 Hb_002316_170 Hb_006949_060--Hb_002316_170 Hb_010381_020 Hb_010381_020 Hb_010407_030--Hb_010381_020 Hb_002739_120 Hb_002739_120 Hb_010407_030--Hb_002739_120 Hb_010407_030--Hb_001009_150 Hb_005854_040 Hb_005854_040 Hb_010407_030--Hb_005854_040 Hb_009078_020 Hb_009078_020 Hb_010407_030--Hb_009078_020 Hb_003964_110 Hb_003964_110 Hb_000227_320--Hb_003964_110 Hb_000665_260 Hb_000665_260 Hb_000227_320--Hb_000665_260 Hb_000072_020 Hb_000072_020 Hb_000227_320--Hb_000072_020 Hb_033363_010 Hb_033363_010 Hb_000227_320--Hb_033363_010 Hb_000227_320--Hb_000950_040 Hb_005588_120 Hb_005588_120 Hb_132840_030--Hb_005588_120 Hb_001514_240 Hb_001514_240 Hb_132840_030--Hb_001514_240 Hb_026698_020 Hb_026698_020 Hb_132840_030--Hb_026698_020 Hb_132840_030--Hb_000227_320 Hb_001404_090 Hb_001404_090 Hb_132840_030--Hb_001404_090 Hb_000732_230 Hb_000732_230 Hb_000950_040--Hb_000732_230 Hb_052117_010 Hb_052117_010 Hb_000950_040--Hb_052117_010 Hb_000196_010 Hb_000196_010 Hb_000950_040--Hb_000196_010 Hb_115513_040 Hb_115513_040 Hb_000950_040--Hb_115513_040 Hb_001009_150--Hb_002739_120 Hb_001195_420 Hb_001195_420 Hb_001009_150--Hb_001195_420 Hb_000318_040 Hb_000318_040 Hb_001009_150--Hb_000318_040 Hb_028077_020 Hb_028077_020 Hb_001009_150--Hb_028077_020 Hb_000220_080 Hb_000220_080 Hb_002316_170--Hb_000220_080 Hb_000000_120 Hb_000000_120 Hb_002316_170--Hb_000000_120 Hb_002316_170--Hb_010407_030 Hb_002316_170--Hb_001009_150 Hb_005772_030 Hb_005772_030 Hb_002316_170--Hb_005772_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.632628 4.14942 3.10529 5.29774 0.690043 0.984567
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.764388 0.405654 0.346624 3.29408 3.12159

CAGE analysis