Hb_001404_090

Information

Type -
Description -
Location Contig1404: 79794-90097
Sequence    

Annotation

kegg
ID rcu:RCOM_0708940
description microtubule motor, putative
nr
ID XP_010430934.1
description PREDICTED: kinesin-like protein NACK2 [Camelina sativa]
swissprot
ID Q8S949
description Kinesin-like protein NACK2 OS=Nicotiana tabacum GN=NACK2 PE=1 SV=1
trembl
ID A0A067KCW0
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_07548 PE=3 SV=1
Gene Ontology
ID GO:0005488
description kinesin-like protein nack2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10939: 63750-88132 , PASA_asmbl_10941: 84233-84472 , PASA_asmbl_10942: 85997-86208 , PASA_asmbl_10943: 86468-88003 , PASA_asmbl_10945: 88360-88703
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001404_090 0.0 - - PREDICTED: kinesin-like protein NACK2 [Camelina sativa]
2 Hb_000416_060 0.106626092 - - PREDICTED: uncharacterized protein LOC105649718 [Jatropha curcas]
3 Hb_000094_150 0.1087956253 - - -
4 Hb_132840_030 0.1110816676 transcription factor TF Family: MYB-related lhy1 [Populus tremula]
5 Hb_005588_120 0.1141879695 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001307_200 0.1185390332 - - PREDICTED: uncharacterized protein LOC105644489 [Jatropha curcas]
7 Hb_073973_020 0.1231849588 - - PREDICTED: DIS3-like exonuclease 2 [Jatropha curcas]
8 Hb_024714_070 0.1253256306 - - PREDICTED: uncharacterized protein LOC105642502 [Jatropha curcas]
9 Hb_001059_060 0.1253902644 - - PREDICTED: bifunctional riboflavin kinase/FMN phosphatase [Jatropha curcas]
10 Hb_000227_320 0.1258287239 - - unnamed protein product [Vitis vinifera]
11 Hb_000221_180 0.1264967142 - - VQ motif-containing family protein [Populus trichocarpa]
12 Hb_007850_010 0.1297839141 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF5.4 [Jatropha curcas]
13 Hb_002383_050 0.1311329176 - - PREDICTED: uncharacterized protein LOC105628744 [Jatropha curcas]
14 Hb_000175_270 0.1313040533 - - PREDICTED: methyl-CpG-binding domain-containing protein 11 isoform X1 [Jatropha curcas]
15 Hb_001514_240 0.1330720784 - - PREDICTED: aspartic proteinase CDR1 [Jatropha curcas]
16 Hb_029695_120 0.1330724785 - - hypothetical protein POPTR_0002s05320g [Populus trichocarpa]
17 Hb_000473_150 0.1332994923 - - PREDICTED: pullulanase 1, chloroplastic [Jatropha curcas]
18 Hb_000684_050 0.1350644249 - - PREDICTED: MLO-like protein 6 [Sesamum indicum]
19 Hb_019863_060 0.1353006167 - - PREDICTED: target of Myb protein 1-like [Populus euphratica]
20 Hb_006949_060 0.1372112846 - - PREDICTED: aminopeptidase M1-like [Jatropha curcas]

Gene co-expression network

sample Hb_001404_090 Hb_001404_090 Hb_000416_060 Hb_000416_060 Hb_001404_090--Hb_000416_060 Hb_000094_150 Hb_000094_150 Hb_001404_090--Hb_000094_150 Hb_132840_030 Hb_132840_030 Hb_001404_090--Hb_132840_030 Hb_005588_120 Hb_005588_120 Hb_001404_090--Hb_005588_120 Hb_001307_200 Hb_001307_200 Hb_001404_090--Hb_001307_200 Hb_073973_020 Hb_073973_020 Hb_001404_090--Hb_073973_020 Hb_000416_060--Hb_005588_120 Hb_001699_170 Hb_001699_170 Hb_000416_060--Hb_001699_170 Hb_000800_010 Hb_000800_010 Hb_000416_060--Hb_000800_010 Hb_019654_110 Hb_019654_110 Hb_000416_060--Hb_019654_110 Hb_000416_060--Hb_132840_030 Hb_002010_090 Hb_002010_090 Hb_000094_150--Hb_002010_090 Hb_000256_160 Hb_000256_160 Hb_000094_150--Hb_000256_160 Hb_001059_060 Hb_001059_060 Hb_000094_150--Hb_001059_060 Hb_000261_310 Hb_000261_310 Hb_000094_150--Hb_000261_310 Hb_000248_100 Hb_000248_100 Hb_000094_150--Hb_000248_100 Hb_132840_030--Hb_005588_120 Hb_006949_060 Hb_006949_060 Hb_132840_030--Hb_006949_060 Hb_001514_240 Hb_001514_240 Hb_132840_030--Hb_001514_240 Hb_026698_020 Hb_026698_020 Hb_132840_030--Hb_026698_020 Hb_000227_320 Hb_000227_320 Hb_132840_030--Hb_000227_320 Hb_004129_010 Hb_004129_010 Hb_005588_120--Hb_004129_010 Hb_005588_120--Hb_000256_160 Hb_001235_130 Hb_001235_130 Hb_005588_120--Hb_001235_130 Hb_000340_220 Hb_000340_220 Hb_005588_120--Hb_000340_220 Hb_001307_200--Hb_073973_020 Hb_004096_220 Hb_004096_220 Hb_001307_200--Hb_004096_220 Hb_001268_300 Hb_001268_300 Hb_001307_200--Hb_001268_300 Hb_002888_040 Hb_002888_040 Hb_001307_200--Hb_002888_040 Hb_000221_180 Hb_000221_180 Hb_001307_200--Hb_000221_180 Hb_000417_410 Hb_000417_410 Hb_001307_200--Hb_000417_410 Hb_073973_020--Hb_000221_180 Hb_073973_020--Hb_000417_410 Hb_073973_020--Hb_001268_300 Hb_073973_020--Hb_002888_040 Hb_001496_120 Hb_001496_120 Hb_073973_020--Hb_001496_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.163191 2.35818 1.28391 1.59887 0.313021 0.197587
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.51405 0.319296 0.120515 1.39124 2.01374

CAGE analysis