Hb_001699_170

Information

Type -
Description -
Location Contig1699: 132489-134477
Sequence    

Annotation

kegg
ID rcu:RCOM_0430440
description hypothetical protein
nr
ID XP_002533794.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q6BTZ4
description Vacuolar protein 8 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=VAC8 PE=3 SV=4
trembl
ID B9T6C5
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0430440 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 017_N13.ab1: 133628-134009 , 035_O09.ab1: 133285-134009 , 049_H03.ab1: 133405-134008

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001699_170 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_002046_060 0.0852856359 - - PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase [Jatropha curcas]
3 Hb_000416_060 0.088197582 - - PREDICTED: uncharacterized protein LOC105649718 [Jatropha curcas]
4 Hb_031089_050 0.0904007657 - - kinase, putative [Ricinus communis]
5 Hb_005588_120 0.0986678529 - - conserved hypothetical protein [Ricinus communis]
6 Hb_003581_130 0.0988716201 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
7 Hb_004030_060 0.1136453541 - - receptor protein kinase zmpk1, putative [Ricinus communis]
8 Hb_004943_040 0.1177001529 - - PREDICTED: BTB/POZ domain-containing protein At1g30440 isoform X1 [Jatropha curcas]
9 Hb_000800_010 0.1193451978 - - PREDICTED: glycosyltransferase family protein 64 protein C5 [Jatropha curcas]
10 Hb_002311_130 0.1250072949 - - PREDICTED: importin subunit alpha-2 isoform X2 [Jatropha curcas]
11 Hb_001956_060 0.1253434861 - - PREDICTED: oxysterol-binding protein-related protein 3C-like [Jatropha curcas]
12 Hb_132840_030 0.1259910628 transcription factor TF Family: MYB-related lhy1 [Populus tremula]
13 Hb_000157_140 0.126755172 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
14 Hb_004884_090 0.1305633312 - - importin beta-1, putative [Ricinus communis]
15 Hb_023344_110 0.1309781389 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 [Jatropha curcas]
16 Hb_002349_030 0.1315148045 - - conserved hypothetical protein [Ricinus communis]
17 Hb_007313_040 0.1317668946 - - hypothetical protein JCGZ_23401 [Jatropha curcas]
18 Hb_006816_480 0.132050169 - - PREDICTED: F-box/LRR-repeat protein 3 isoform X1 [Jatropha curcas]
19 Hb_000540_100 0.1336591499 - - PREDICTED: BTB/POZ domain-containing protein At5g60050 [Jatropha curcas]
20 Hb_000015_090 0.134454935 - - PREDICTED: ACT domain-containing protein ACR9 [Jatropha curcas]

Gene co-expression network

sample Hb_001699_170 Hb_001699_170 Hb_002046_060 Hb_002046_060 Hb_001699_170--Hb_002046_060 Hb_000416_060 Hb_000416_060 Hb_001699_170--Hb_000416_060 Hb_031089_050 Hb_031089_050 Hb_001699_170--Hb_031089_050 Hb_005588_120 Hb_005588_120 Hb_001699_170--Hb_005588_120 Hb_003581_130 Hb_003581_130 Hb_001699_170--Hb_003581_130 Hb_004030_060 Hb_004030_060 Hb_001699_170--Hb_004030_060 Hb_002349_030 Hb_002349_030 Hb_002046_060--Hb_002349_030 Hb_000912_100 Hb_000912_100 Hb_002046_060--Hb_000912_100 Hb_006469_070 Hb_006469_070 Hb_002046_060--Hb_006469_070 Hb_003975_010 Hb_003975_010 Hb_002046_060--Hb_003975_010 Hb_000012_240 Hb_000012_240 Hb_002046_060--Hb_000012_240 Hb_000416_060--Hb_005588_120 Hb_000800_010 Hb_000800_010 Hb_000416_060--Hb_000800_010 Hb_019654_110 Hb_019654_110 Hb_000416_060--Hb_019654_110 Hb_001404_090 Hb_001404_090 Hb_000416_060--Hb_001404_090 Hb_132840_030 Hb_132840_030 Hb_000416_060--Hb_132840_030 Hb_007897_030 Hb_007897_030 Hb_031089_050--Hb_007897_030 Hb_000473_120 Hb_000473_120 Hb_031089_050--Hb_000473_120 Hb_020805_120 Hb_020805_120 Hb_031089_050--Hb_020805_120 Hb_031089_050--Hb_003581_130 Hb_004943_040 Hb_004943_040 Hb_031089_050--Hb_004943_040 Hb_004129_010 Hb_004129_010 Hb_005588_120--Hb_004129_010 Hb_005588_120--Hb_132840_030 Hb_000256_160 Hb_000256_160 Hb_005588_120--Hb_000256_160 Hb_001235_130 Hb_001235_130 Hb_005588_120--Hb_001235_130 Hb_000340_220 Hb_000340_220 Hb_005588_120--Hb_000340_220 Hb_000015_200 Hb_000015_200 Hb_003581_130--Hb_000015_200 Hb_000452_030 Hb_000452_030 Hb_003581_130--Hb_000452_030 Hb_000015_090 Hb_000015_090 Hb_003581_130--Hb_000015_090 Hb_003581_130--Hb_000340_220 Hb_003581_130--Hb_002349_030 Hb_000369_080 Hb_000369_080 Hb_003581_130--Hb_000369_080 Hb_000157_140 Hb_000157_140 Hb_004030_060--Hb_000157_140 Hb_000683_050 Hb_000683_050 Hb_004030_060--Hb_000683_050 Hb_000494_030 Hb_000494_030 Hb_004030_060--Hb_000494_030 Hb_009535_030 Hb_009535_030 Hb_004030_060--Hb_009535_030 Hb_010390_010 Hb_010390_010 Hb_004030_060--Hb_010390_010 Hb_005854_040 Hb_005854_040 Hb_004030_060--Hb_005854_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.657038 8.95972 4.47513 9.96269 0.754964 1.57549
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.17986 1.67944 2.7439 4.96879 8.94724

CAGE analysis