Hb_000800_010

Information

Type -
Description -
Location Contig800: 26733-32385
Sequence    

Annotation

kegg
ID rcu:RCOM_0115300
description transferase, transferring glycosyl groups, putative (EC:2.4.1.223)
nr
ID XP_012090202.1
description PREDICTED: glycosyltransferase family protein 64 protein C5 [Jatropha curcas]
swissprot
ID Q84WB7
description Glycosyltransferase family protein 64 protein C5 OS=Arabidopsis thaliana GN=At5g04500 PE=2 SV=1
trembl
ID A0A067LL22
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01554 PE=4 SV=1
Gene Ontology
ID GO:0016021
description glycosyltransferase family protein 64 protein c5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58758: 26860-32402 , PASA_asmbl_58759: 28337-32402 , PASA_asmbl_58761: 29452-29567 , PASA_asmbl_58762: 28999-29272
cDNA
(Sanger)
(ID:Location)		 042_H13.ab1: 26878-27195

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000800_010 0.0 - - PREDICTED: glycosyltransferase family protein 64 protein C5 [Jatropha curcas]
2 Hb_000416_060 0.0893444465 - - PREDICTED: uncharacterized protein LOC105649718 [Jatropha curcas]
3 Hb_005588_120 0.1020193105 - - conserved hypothetical protein [Ricinus communis]
4 Hb_006414_010 0.1032811062 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 9 [Jatropha curcas]
5 Hb_004129_010 0.1172448236 - - aspartate aminotransferase, putative [Ricinus communis]
6 Hb_001699_170 0.1193451978 - - conserved hypothetical protein [Ricinus communis]
7 Hb_132840_030 0.1202435269 transcription factor TF Family: MYB-related lhy1 [Populus tremula]
8 Hb_004007_200 0.1207501676 - - PREDICTED: BTB/POZ domain-containing protein NPY5 [Jatropha curcas]
9 Hb_000386_050 0.1231763496 - - PREDICTED: 2-isopropylmalate synthase 2, chloroplastic-like [Jatropha curcas]
10 Hb_001969_130 0.1240235226 - - PREDICTED: molybdate transporter 2 [Jatropha curcas]
11 Hb_001250_080 0.1249343854 - - PREDICTED: F-box/kelch-repeat protein At1g23390 [Jatropha curcas]
12 Hb_031089_050 0.1275029443 - - kinase, putative [Ricinus communis]
13 Hb_007894_070 0.1344415795 - - PREDICTED: uncharacterized protein LOC105632955 [Jatropha curcas]
14 Hb_030312_030 0.1354078618 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40 isoform X1 [Jatropha curcas]
15 Hb_187959_010 0.1359221475 - - hypothetical protein JCGZ_12266 [Jatropha curcas]
16 Hb_000028_430 0.1362196478 - - PREDICTED: uncharacterized protein LOC105641369 isoform X1 [Jatropha curcas]
17 Hb_004943_040 0.1365264664 - - PREDICTED: BTB/POZ domain-containing protein At1g30440 isoform X1 [Jatropha curcas]
18 Hb_000227_280 0.1366291639 - - PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Jatropha curcas]
19 Hb_001124_140 0.1371759475 - - PREDICTED: inactive beta-amylase 9 [Jatropha curcas]
20 Hb_019654_110 0.1390465508 - - PREDICTED: F-box protein SKIP23-like [Jatropha curcas]

Gene co-expression network

sample Hb_000800_010 Hb_000800_010 Hb_000416_060 Hb_000416_060 Hb_000800_010--Hb_000416_060 Hb_005588_120 Hb_005588_120 Hb_000800_010--Hb_005588_120 Hb_006414_010 Hb_006414_010 Hb_000800_010--Hb_006414_010 Hb_004129_010 Hb_004129_010 Hb_000800_010--Hb_004129_010 Hb_001699_170 Hb_001699_170 Hb_000800_010--Hb_001699_170 Hb_132840_030 Hb_132840_030 Hb_000800_010--Hb_132840_030 Hb_000416_060--Hb_005588_120 Hb_000416_060--Hb_001699_170 Hb_019654_110 Hb_019654_110 Hb_000416_060--Hb_019654_110 Hb_001404_090 Hb_001404_090 Hb_000416_060--Hb_001404_090 Hb_000416_060--Hb_132840_030 Hb_005588_120--Hb_004129_010 Hb_005588_120--Hb_132840_030 Hb_000256_160 Hb_000256_160 Hb_005588_120--Hb_000256_160 Hb_001235_130 Hb_001235_130 Hb_005588_120--Hb_001235_130 Hb_000340_220 Hb_000340_220 Hb_005588_120--Hb_000340_220 Hb_007894_070 Hb_007894_070 Hb_006414_010--Hb_007894_070 Hb_001486_100 Hb_001486_100 Hb_006414_010--Hb_001486_100 Hb_000210_040 Hb_000210_040 Hb_006414_010--Hb_000210_040 Hb_002740_100 Hb_002740_100 Hb_006414_010--Hb_002740_100 Hb_000659_040 Hb_000659_040 Hb_006414_010--Hb_000659_040 Hb_001754_050 Hb_001754_050 Hb_004129_010--Hb_001754_050 Hb_007229_050 Hb_007229_050 Hb_004129_010--Hb_007229_050 Hb_004129_010--Hb_000256_160 Hb_000157_140 Hb_000157_140 Hb_004129_010--Hb_000157_140 Hb_003030_010 Hb_003030_010 Hb_004129_010--Hb_003030_010 Hb_002046_060 Hb_002046_060 Hb_001699_170--Hb_002046_060 Hb_031089_050 Hb_031089_050 Hb_001699_170--Hb_031089_050 Hb_001699_170--Hb_005588_120 Hb_003581_130 Hb_003581_130 Hb_001699_170--Hb_003581_130 Hb_004030_060 Hb_004030_060 Hb_001699_170--Hb_004030_060 Hb_006949_060 Hb_006949_060 Hb_132840_030--Hb_006949_060 Hb_001514_240 Hb_001514_240 Hb_132840_030--Hb_001514_240 Hb_026698_020 Hb_026698_020 Hb_132840_030--Hb_026698_020 Hb_000227_320 Hb_000227_320 Hb_132840_030--Hb_000227_320 Hb_132840_030--Hb_001404_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.4931 39.4953 22.2986 49.2157 1.62486 2.72077
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.51431 8.24054 5.98092 23.1068 49.6539

CAGE analysis