Hb_031089_050

Information

Type -
Description -
Location Contig31089: 48114-50795
Sequence    

Annotation

kegg
ID rcu:RCOM_1058620
description kinase, putative (EC:2.7.10.2)
nr
ID XP_002528705.1
description kinase, putative [Ricinus communis]
swissprot
ID Q9SCZ4
description Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1
trembl
ID B9SRU2
description Kinase, putative OS=Ricinus communis GN=RCOM_1058620 PE=3 SV=1
Gene Ontology
ID GO:0005622
description receptor-like protein kinase feronia

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031089_050 0.0 - - kinase, putative [Ricinus communis]
2 Hb_007897_030 0.0833045228 - - PREDICTED: serine/threonine-protein kinase-like protein CCR2 [Jatropha curcas]
3 Hb_001699_170 0.0904007657 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000473_120 0.0981057753 - - hypothetical protein JCGZ_16177 [Jatropha curcas]
5 Hb_020805_120 0.1051881099 - - PREDICTED: glutamate receptor 3.3 [Jatropha curcas]
6 Hb_003581_130 0.1092528529 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
7 Hb_004943_040 0.1125040204 - - PREDICTED: BTB/POZ domain-containing protein At1g30440 isoform X1 [Jatropha curcas]
8 Hb_002311_130 0.1151579405 - - PREDICTED: importin subunit alpha-2 isoform X2 [Jatropha curcas]
9 Hb_002046_060 0.1165192771 - - PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase [Jatropha curcas]
10 Hb_000416_060 0.1171859013 - - PREDICTED: uncharacterized protein LOC105649718 [Jatropha curcas]
11 Hb_000753_120 0.1174088408 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
12 Hb_002805_090 0.1200608506 - - Ran GTPase binding protein, putative [Ricinus communis]
13 Hb_003006_080 0.1230572698 - - PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like isoform X1 [Jatropha curcas]
14 Hb_003216_130 0.1238998333 - - PREDICTED: uncharacterized protein LOC105641500 [Jatropha curcas]
15 Hb_023344_110 0.1273528967 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 [Jatropha curcas]
16 Hb_000800_010 0.1275029443 - - PREDICTED: glycosyltransferase family protein 64 protein C5 [Jatropha curcas]
17 Hb_002909_100 0.1284667704 - - PREDICTED: uncharacterized protein LOC105648153 [Jatropha curcas]
18 Hb_000138_060 0.128558424 - - PREDICTED: protein trichome birefringence [Jatropha curcas]
19 Hb_003975_010 0.1290628382 - - PREDICTED: protein RTF2 homolog [Jatropha curcas]
20 Hb_000570_020 0.1294925546 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9H isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_031089_050 Hb_031089_050 Hb_007897_030 Hb_007897_030 Hb_031089_050--Hb_007897_030 Hb_001699_170 Hb_001699_170 Hb_031089_050--Hb_001699_170 Hb_000473_120 Hb_000473_120 Hb_031089_050--Hb_000473_120 Hb_020805_120 Hb_020805_120 Hb_031089_050--Hb_020805_120 Hb_003581_130 Hb_003581_130 Hb_031089_050--Hb_003581_130 Hb_004943_040 Hb_004943_040 Hb_031089_050--Hb_004943_040 Hb_002311_130 Hb_002311_130 Hb_007897_030--Hb_002311_130 Hb_002400_060 Hb_002400_060 Hb_007897_030--Hb_002400_060 Hb_005192_010 Hb_005192_010 Hb_007897_030--Hb_005192_010 Hb_001998_150 Hb_001998_150 Hb_007897_030--Hb_001998_150 Hb_002805_090 Hb_002805_090 Hb_007897_030--Hb_002805_090 Hb_002046_060 Hb_002046_060 Hb_001699_170--Hb_002046_060 Hb_000416_060 Hb_000416_060 Hb_001699_170--Hb_000416_060 Hb_005588_120 Hb_005588_120 Hb_001699_170--Hb_005588_120 Hb_001699_170--Hb_003581_130 Hb_004030_060 Hb_004030_060 Hb_001699_170--Hb_004030_060 Hb_011828_010 Hb_011828_010 Hb_000473_120--Hb_011828_010 Hb_001998_220 Hb_001998_220 Hb_000473_120--Hb_001998_220 Hb_000473_120--Hb_020805_120 Hb_003006_080 Hb_003006_080 Hb_000473_120--Hb_003006_080 Hb_000473_120--Hb_002311_130 Hb_020805_120--Hb_003006_080 Hb_000138_060 Hb_000138_060 Hb_020805_120--Hb_000138_060 Hb_000109_190 Hb_000109_190 Hb_020805_120--Hb_000109_190 Hb_002289_150 Hb_002289_150 Hb_020805_120--Hb_002289_150 Hb_000015_200 Hb_000015_200 Hb_003581_130--Hb_000015_200 Hb_000452_030 Hb_000452_030 Hb_003581_130--Hb_000452_030 Hb_000015_090 Hb_000015_090 Hb_003581_130--Hb_000015_090 Hb_000340_220 Hb_000340_220 Hb_003581_130--Hb_000340_220 Hb_002349_030 Hb_002349_030 Hb_003581_130--Hb_002349_030 Hb_000369_080 Hb_000369_080 Hb_003581_130--Hb_000369_080 Hb_000570_020 Hb_000570_020 Hb_004943_040--Hb_000570_020 Hb_000283_140 Hb_000283_140 Hb_004943_040--Hb_000283_140 Hb_001865_100 Hb_001865_100 Hb_004943_040--Hb_001865_100 Hb_000422_080 Hb_000422_080 Hb_004943_040--Hb_000422_080 Hb_000157_140 Hb_000157_140 Hb_004943_040--Hb_000157_140 Hb_004943_040--Hb_002805_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.12268 40.169 18.5968 49.4803 5.59016 6.6691
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.97547 6.09461 9.69166 16.7335 46.3851

CAGE analysis