Hb_003006_080

Information

Type -
Description -
Location Contig3006: 125038-132929
Sequence    

Annotation

kegg
ID fve:101309997
description heparan-alpha-glucosaminide N-acetyltransferase-like
nr
ID XP_012081797.1
description PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like isoform X1 [Jatropha curcas]
swissprot
ID Q68CP4
description Heparan-alpha-glucosaminide N-acetyltransferase OS=Homo sapiens GN=HGSNAT PE=1 SV=2
trembl
ID A0A067K0K7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18834 PE=4 SV=1
Gene Ontology
ID GO:0015019
description heparan-alpha-glucosaminide n-acetyltransferase-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31694: 124853-126880 , PASA_asmbl_31695: 128302-128972 , PASA_asmbl_31696: 129002-132942
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003006_080 0.0 - - PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like isoform X1 [Jatropha curcas]
2 Hb_030312_030 0.1049710086 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40 isoform X1 [Jatropha curcas]
3 Hb_005116_140 0.1067595451 - - PREDICTED: RAN GTPase-activating protein 1 [Jatropha curcas]
4 Hb_002805_090 0.1080373679 - - Ran GTPase binding protein, putative [Ricinus communis]
5 Hb_000473_120 0.1124241782 - - hypothetical protein JCGZ_16177 [Jatropha curcas]
6 Hb_019654_110 0.1130072458 - - PREDICTED: F-box protein SKIP23-like [Jatropha curcas]
7 Hb_010381_020 0.1141050439 - - Endosomal P24A protein precursor, putative [Ricinus communis]
8 Hb_001195_310 0.1145520594 - - ATP binding protein, putative [Ricinus communis]
9 Hb_001105_130 0.1148523811 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Jatropha curcas]
10 Hb_102763_010 0.1187171427 - - PREDICTED: heat shock cognate protein 80 [Jatropha curcas]
11 Hb_000157_140 0.1198557863 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
12 Hb_009535_030 0.1206894796 - - CP2 [Hevea brasiliensis]
13 Hb_020805_120 0.122476448 - - PREDICTED: glutamate receptor 3.3 [Jatropha curcas]
14 Hb_031089_050 0.1230572698 - - kinase, putative [Ricinus communis]
15 Hb_002311_130 0.124842652 - - PREDICTED: importin subunit alpha-2 isoform X2 [Jatropha curcas]
16 Hb_098795_030 0.1258161374 - - PREDICTED: metal tolerance protein 1-like [Vitis vinifera]
17 Hb_003371_190 0.1261066512 - - PREDICTED: beta-glucosidase 13-like [Jatropha curcas]
18 Hb_029584_100 0.1264467545 - - Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [Gossypium arboreum]
19 Hb_001247_270 0.1271853324 - - PREDICTED: probable L-cysteine desulfhydrase, chloroplastic [Jatropha curcas]
20 Hb_001473_170 0.1285504133 - - PREDICTED: non-lysosomal glucosylceramidase [Jatropha curcas]

Gene co-expression network

sample Hb_003006_080 Hb_003006_080 Hb_030312_030 Hb_030312_030 Hb_003006_080--Hb_030312_030 Hb_005116_140 Hb_005116_140 Hb_003006_080--Hb_005116_140 Hb_002805_090 Hb_002805_090 Hb_003006_080--Hb_002805_090 Hb_000473_120 Hb_000473_120 Hb_003006_080--Hb_000473_120 Hb_019654_110 Hb_019654_110 Hb_003006_080--Hb_019654_110 Hb_010381_020 Hb_010381_020 Hb_003006_080--Hb_010381_020 Hb_001195_370 Hb_001195_370 Hb_030312_030--Hb_001195_370 Hb_003783_050 Hb_003783_050 Hb_030312_030--Hb_003783_050 Hb_001054_060 Hb_001054_060 Hb_030312_030--Hb_001054_060 Hb_000941_120 Hb_000941_120 Hb_030312_030--Hb_000941_120 Hb_030312_030--Hb_002805_090 Hb_030959_010 Hb_030959_010 Hb_005116_140--Hb_030959_010 Hb_005116_140--Hb_002805_090 Hb_000120_860 Hb_000120_860 Hb_005116_140--Hb_000120_860 Hb_009674_050 Hb_009674_050 Hb_005116_140--Hb_009674_050 Hb_002311_130 Hb_002311_130 Hb_005116_140--Hb_002311_130 Hb_000025_500 Hb_000025_500 Hb_005116_140--Hb_000025_500 Hb_002805_090--Hb_002311_130 Hb_000066_040 Hb_000066_040 Hb_002805_090--Hb_000066_040 Hb_001998_220 Hb_001998_220 Hb_002805_090--Hb_001998_220 Hb_002805_090--Hb_000025_500 Hb_011174_080 Hb_011174_080 Hb_002805_090--Hb_011174_080 Hb_031089_050 Hb_031089_050 Hb_000473_120--Hb_031089_050 Hb_011828_010 Hb_011828_010 Hb_000473_120--Hb_011828_010 Hb_000473_120--Hb_001998_220 Hb_020805_120 Hb_020805_120 Hb_000473_120--Hb_020805_120 Hb_000473_120--Hb_002311_130 Hb_000416_060 Hb_000416_060 Hb_019654_110--Hb_000416_060 Hb_029584_100 Hb_029584_100 Hb_019654_110--Hb_029584_100 Hb_002151_100 Hb_002151_100 Hb_019654_110--Hb_002151_100 Hb_005588_120 Hb_005588_120 Hb_019654_110--Hb_005588_120 Hb_001235_130 Hb_001235_130 Hb_019654_110--Hb_001235_130 Hb_102763_010 Hb_102763_010 Hb_010381_020--Hb_102763_010 Hb_010407_030 Hb_010407_030 Hb_010381_020--Hb_010407_030 Hb_005000_090 Hb_005000_090 Hb_010381_020--Hb_005000_090 Hb_000167_040 Hb_000167_040 Hb_010381_020--Hb_000167_040 Hb_000997_070 Hb_000997_070 Hb_010381_020--Hb_000997_070 Hb_010381_020--Hb_002311_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.713858 5.21286 2.7522 10.8749 1.25458 1.31143
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.06451 0.864451 0.96114 5.1064 9.23503

CAGE analysis