Hb_000494_030

Information

Type -
Description -
Location Contig494: 23245-25268
Sequence    

Annotation

kegg
ID rcu:RCOM_1608690
description hypothetical protein
nr
ID XP_012083665.1
description PREDICTED: uncharacterized protein LOC105643196 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KAJ0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14600 PE=4 SV=1
Gene Ontology
ID GO:0016787
description peptidyl-prolyl cis-trans isomerase fkbp20-2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45396: 23387-23921 , PASA_asmbl_45397: 24034-25650
cDNA
(Sanger)
(ID:Location)		 025_P01r.ab1: 19893-22629

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000494_030 0.0 - - PREDICTED: uncharacterized protein LOC105643196 [Jatropha curcas]
2 Hb_000701_030 0.0779698188 - - Sodium/hydrogen exchanger 6 -like protein [Gossypium arboreum]
3 Hb_000683_050 0.0798980745 - - PREDICTED: probable carbohydrate esterase At4g34215 [Jatropha curcas]
4 Hb_004030_060 0.0835456674 - - receptor protein kinase zmpk1, putative [Ricinus communis]
5 Hb_010390_010 0.0870410566 - - casein kinase, putative [Ricinus communis]
6 Hb_021576_070 0.0881243382 - - hypothetical protein PRUPE_ppa002736mg [Prunus persica]
7 Hb_007416_070 0.0891752207 transcription factor TF Family: B3 hypothetical protein JCGZ_07038 [Jatropha curcas]
8 Hb_001226_130 0.0906215558 - - PREDICTED: aminopeptidase M1-like [Jatropha curcas]
9 Hb_000254_070 0.0912079159 - - PREDICTED: protein disulfide isomerase-like 1-6 [Jatropha curcas]
10 Hb_000260_510 0.0931927793 - - PREDICTED: probable galacturonosyltransferase 7 isoform X3 [Jatropha curcas]
11 Hb_031527_080 0.0940044317 - - utp-glucose-1-phosphate uridylyltransferase, putative [Ricinus communis]
12 Hb_001473_170 0.0941895276 - - PREDICTED: non-lysosomal glucosylceramidase [Jatropha curcas]
13 Hb_003994_220 0.0951378582 - - PREDICTED: V-type proton ATPase catalytic subunit A [Jatropha curcas]
14 Hb_015884_020 0.0978132925 - - PREDICTED: protein PIR [Jatropha curcas]
15 Hb_000649_060 0.0978756079 - - PREDICTED: E3 ubiquitin protein ligase RIE1 [Jatropha curcas]
16 Hb_002631_130 0.0994030077 - - PREDICTED: L-ascorbate oxidase-like [Jatropha curcas]
17 Hb_000979_130 0.103731038 - - PREDICTED: phosphoglucomutase, cytoplasmic [Jatropha curcas]
18 Hb_000152_710 0.1038107276 - - PREDICTED: putative glycerol-3-phosphate transporter 1 [Jatropha curcas]
19 Hb_004094_020 0.1039611531 - - Pyruvate kinase family protein isoform 1 [Theobroma cacao]
20 Hb_000265_140 0.1043879791 - - PREDICTED: transmembrane 9 superfamily member 12 [Jatropha curcas]

Gene co-expression network

sample Hb_000494_030 Hb_000494_030 Hb_000701_030 Hb_000701_030 Hb_000494_030--Hb_000701_030 Hb_000683_050 Hb_000683_050 Hb_000494_030--Hb_000683_050 Hb_004030_060 Hb_004030_060 Hb_000494_030--Hb_004030_060 Hb_010390_010 Hb_010390_010 Hb_000494_030--Hb_010390_010 Hb_021576_070 Hb_021576_070 Hb_000494_030--Hb_021576_070 Hb_007416_070 Hb_007416_070 Hb_000494_030--Hb_007416_070 Hb_000265_140 Hb_000265_140 Hb_000701_030--Hb_000265_140 Hb_000701_030--Hb_021576_070 Hb_000254_070 Hb_000254_070 Hb_000701_030--Hb_000254_070 Hb_000003_310 Hb_000003_310 Hb_000701_030--Hb_000003_310 Hb_001097_040 Hb_001097_040 Hb_000701_030--Hb_001097_040 Hb_000683_050--Hb_007416_070 Hb_000683_050--Hb_004030_060 Hb_001811_170 Hb_001811_170 Hb_000683_050--Hb_001811_170 Hb_000683_050--Hb_010390_010 Hb_005854_040 Hb_005854_040 Hb_000683_050--Hb_005854_040 Hb_000157_140 Hb_000157_140 Hb_004030_060--Hb_000157_140 Hb_009535_030 Hb_009535_030 Hb_004030_060--Hb_009535_030 Hb_004030_060--Hb_010390_010 Hb_004030_060--Hb_005854_040 Hb_005016_010 Hb_005016_010 Hb_010390_010--Hb_005016_010 Hb_001473_170 Hb_001473_170 Hb_010390_010--Hb_001473_170 Hb_010390_010--Hb_007416_070 Hb_000152_710 Hb_000152_710 Hb_021576_070--Hb_000152_710 Hb_004109_050 Hb_004109_050 Hb_021576_070--Hb_004109_050 Hb_001216_110 Hb_001216_110 Hb_021576_070--Hb_001216_110 Hb_000418_020 Hb_000418_020 Hb_021576_070--Hb_000418_020 Hb_001754_020 Hb_001754_020 Hb_021576_070--Hb_001754_020 Hb_000703_330 Hb_000703_330 Hb_007416_070--Hb_000703_330 Hb_000009_060 Hb_000009_060 Hb_007416_070--Hb_000009_060 Hb_000197_190 Hb_000197_190 Hb_007416_070--Hb_000197_190 Hb_000367_180 Hb_000367_180 Hb_007416_070--Hb_000367_180 Hb_007416_070--Hb_001811_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.56945 6.21071 7.03429 16.9745 3.1278 3.28332
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.85998 2.30518 5.65084 12.4933 11.6672

CAGE analysis