Hb_000254_070

Information

Type -
Description -
Location Contig254: 109459-116272
Sequence    

Annotation

kegg
ID rcu:RCOM_1493980
description protein disulfide isomerase, putative (EC:2.4.1.119)
nr
ID XP_012073365.1
description PREDICTED: protein disulfide isomerase-like 1-6 [Jatropha curcas]
swissprot
ID Q66GQ3
description Protein disulfide isomerase-like 1-6 OS=Arabidopsis thaliana GN=PDIL1-6 PE=2 SV=1
trembl
ID A0A067KYC7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06296 PE=4 SV=1
Gene Ontology
ID GO:0004579
description protein disulfide isomerase-like 1-6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26530: 109416-116268 , PASA_asmbl_26532: 117193-131054
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000254_070 0.0 - - PREDICTED: protein disulfide isomerase-like 1-6 [Jatropha curcas]
2 Hb_000003_310 0.0722779931 - - PREDICTED: glycosyltransferase-like KOBITO 1 [Jatropha curcas]
3 Hb_000701_030 0.0788233439 - - Sodium/hydrogen exchanger 6 -like protein [Gossypium arboreum]
4 Hb_000679_040 0.0861364477 - - Cellulose synthase 1 [Theobroma cacao]
5 Hb_007317_020 0.0872623712 - - PREDICTED: transmembrane 9 superfamily member 5 isoform X1 [Jatropha curcas]
6 Hb_000418_020 0.0891216027 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
7 Hb_000494_030 0.0912079159 - - PREDICTED: uncharacterized protein LOC105643196 [Jatropha curcas]
8 Hb_021576_070 0.09402218 - - hypothetical protein PRUPE_ppa002736mg [Prunus persica]
9 Hb_021297_020 0.1020265889 - - Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
10 Hb_002072_010 0.1021677363 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001226_130 0.1032995743 - - PREDICTED: aminopeptidase M1-like [Jatropha curcas]
12 Hb_000244_260 0.1053782185 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 isoform X2 [Jatropha curcas]
13 Hb_001473_170 0.1059388784 - - PREDICTED: non-lysosomal glucosylceramidase [Jatropha curcas]
14 Hb_000167_040 0.1062285984 - - PREDICTED: serine carboxypeptidase-like [Jatropha curcas]
15 Hb_001195_310 0.1063257548 - - ATP binding protein, putative [Ricinus communis]
16 Hb_005854_040 0.1075421518 - - conserved hypothetical protein [Ricinus communis]
17 Hb_030565_110 0.1079749708 - - PREDICTED: adenosylhomocysteinase 1 [Jatropha curcas]
18 Hb_000684_310 0.1100327666 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Jatropha curcas]
19 Hb_001021_010 0.1109330098 - - PREDICTED: bifunctional protein FolD 2 [Jatropha curcas]
20 Hb_010381_020 0.113196835 - - Endosomal P24A protein precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000254_070 Hb_000254_070 Hb_000003_310 Hb_000003_310 Hb_000254_070--Hb_000003_310 Hb_000701_030 Hb_000701_030 Hb_000254_070--Hb_000701_030 Hb_000679_040 Hb_000679_040 Hb_000254_070--Hb_000679_040 Hb_007317_020 Hb_007317_020 Hb_000254_070--Hb_007317_020 Hb_000418_020 Hb_000418_020 Hb_000254_070--Hb_000418_020 Hb_000494_030 Hb_000494_030 Hb_000254_070--Hb_000494_030 Hb_000003_310--Hb_000701_030 Hb_021576_070 Hb_021576_070 Hb_000003_310--Hb_021576_070 Hb_000684_310 Hb_000684_310 Hb_000003_310--Hb_000684_310 Hb_000003_310--Hb_000679_040 Hb_000003_310--Hb_000418_020 Hb_000265_140 Hb_000265_140 Hb_000701_030--Hb_000265_140 Hb_000701_030--Hb_021576_070 Hb_000701_030--Hb_000494_030 Hb_001097_040 Hb_001097_040 Hb_000701_030--Hb_001097_040 Hb_001216_110 Hb_001216_110 Hb_000679_040--Hb_001216_110 Hb_011310_050 Hb_011310_050 Hb_000679_040--Hb_011310_050 Hb_001195_310 Hb_001195_310 Hb_000679_040--Hb_001195_310 Hb_001969_140 Hb_001969_140 Hb_000679_040--Hb_001969_140 Hb_000679_040--Hb_021576_070 Hb_005854_040 Hb_005854_040 Hb_007317_020--Hb_005854_040 Hb_000157_140 Hb_000157_140 Hb_007317_020--Hb_000157_140 Hb_098533_010 Hb_098533_010 Hb_007317_020--Hb_098533_010 Hb_010381_020 Hb_010381_020 Hb_007317_020--Hb_010381_020 Hb_001473_170 Hb_001473_170 Hb_007317_020--Hb_001473_170 Hb_000256_230 Hb_000256_230 Hb_000418_020--Hb_000256_230 Hb_000665_170 Hb_000665_170 Hb_000418_020--Hb_000665_170 Hb_002687_200 Hb_002687_200 Hb_000418_020--Hb_002687_200 Hb_000418_020--Hb_021576_070 Hb_002739_120 Hb_002739_120 Hb_000418_020--Hb_002739_120 Hb_003777_030 Hb_003777_030 Hb_000418_020--Hb_003777_030 Hb_000683_050 Hb_000683_050 Hb_000494_030--Hb_000683_050 Hb_004030_060 Hb_004030_060 Hb_000494_030--Hb_004030_060 Hb_010390_010 Hb_010390_010 Hb_000494_030--Hb_010390_010 Hb_000494_030--Hb_021576_070 Hb_007416_070 Hb_007416_070 Hb_000494_030--Hb_007416_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.55859 6.58943 9.12288 23.9433 5.11221 5.45845
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.8667 2.90478 3.3613 15.3026 15.2964

CAGE analysis