Hb_000665_170

Information

Type -
Description -
Location Contig665: 174924-182120
Sequence    

Annotation

kegg
ID csv:101215191
description probable beta-1,3-galactosyltransferase 10-like
nr
ID XP_012076500.1
description PREDICTED: probable beta-1,3-galactosyltransferase 10 [Jatropha curcas]
swissprot
ID Q5XEZ1
description Probable beta-1,3-galactosyltransferase 9 OS=Arabidopsis thaliana GN=B3GALT9 PE=2 SV=1
trembl
ID A0A067KMP8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07136 PE=4 SV=1
Gene Ontology
ID GO:0005794
description probable beta- -galactosyltransferase 9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53213: 177642-178090 , PASA_asmbl_53215: 181887-182078 , PASA_asmbl_53216: 182848-186493
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000665_170 0.0 - - PREDICTED: probable beta-1,3-galactosyltransferase 10 [Jatropha curcas]
2 Hb_000256_230 0.0428158589 - - PREDICTED: uncharacterized protein LOC105637594 [Jatropha curcas]
3 Hb_003777_030 0.0478639504 - - Exocyst complex component, putative [Ricinus communis]
4 Hb_010672_020 0.060362856 - - PREDICTED: ATP synthase gamma chain, chloroplastic-like [Jatropha curcas]
5 Hb_003209_130 0.0669080053 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
6 Hb_007545_010 0.0716071819 - - HIV-1 rev binding protein, hrbl, putative [Ricinus communis]
7 Hb_000389_030 0.0732641486 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B [Jatropha curcas]
8 Hb_000418_020 0.0749653504 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
9 Hb_001250_050 0.0766905118 - - PREDICTED: uncharacterized protein LOC105644623 isoform X1 [Jatropha curcas]
10 Hb_011310_110 0.0769567559 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g25400 isoform X1 [Jatropha curcas]
11 Hb_000035_220 0.0772618184 - - PREDICTED: transmembrane 9 superfamily member 8 [Jatropha curcas]
12 Hb_004126_040 0.0773743205 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002486_050 0.0786043099 - - Multiple inositol polyphosphate phosphatase 1 precursor, putative [Ricinus communis]
14 Hb_002740_080 0.0790552548 - - flap endonuclease-1, putative [Ricinus communis]
15 Hb_002552_040 0.0792180481 - - PREDICTED: uncharacterized protein LOC105641220 [Jatropha curcas]
16 Hb_002687_200 0.0793485149 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000395_110 0.0812734394 - - PREDICTED: molybdate-anion transporter [Jatropha curcas]
18 Hb_000622_110 0.0822832372 - - cmp-sialic acid transporter, putative [Ricinus communis]
19 Hb_003878_200 0.0832251614 - - PREDICTED: V-type proton ATPase subunit D-like [Jatropha curcas]
20 Hb_000815_300 0.0848271388 - - Transmembrane emp24 domain-containing protein 10 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000665_170 Hb_000665_170 Hb_000256_230 Hb_000256_230 Hb_000665_170--Hb_000256_230 Hb_003777_030 Hb_003777_030 Hb_000665_170--Hb_003777_030 Hb_010672_020 Hb_010672_020 Hb_000665_170--Hb_010672_020 Hb_003209_130 Hb_003209_130 Hb_000665_170--Hb_003209_130 Hb_007545_010 Hb_007545_010 Hb_000665_170--Hb_007545_010 Hb_000389_030 Hb_000389_030 Hb_000665_170--Hb_000389_030 Hb_000256_230--Hb_000389_030 Hb_000256_230--Hb_003209_130 Hb_004126_040 Hb_004126_040 Hb_000256_230--Hb_004126_040 Hb_000622_110 Hb_000622_110 Hb_000256_230--Hb_000622_110 Hb_002486_050 Hb_002486_050 Hb_000256_230--Hb_002486_050 Hb_001250_050 Hb_001250_050 Hb_003777_030--Hb_001250_050 Hb_003777_030--Hb_007545_010 Hb_132082_010 Hb_132082_010 Hb_003777_030--Hb_132082_010 Hb_000815_300 Hb_000815_300 Hb_003777_030--Hb_000815_300 Hb_003777_030--Hb_000256_230 Hb_011310_110 Hb_011310_110 Hb_010672_020--Hb_011310_110 Hb_000705_230 Hb_000705_230 Hb_010672_020--Hb_000705_230 Hb_000395_110 Hb_000395_110 Hb_010672_020--Hb_000395_110 Hb_010672_020--Hb_007545_010 Hb_006120_050 Hb_006120_050 Hb_010672_020--Hb_006120_050 Hb_003209_130--Hb_002486_050 Hb_005535_080 Hb_005535_080 Hb_003209_130--Hb_005535_080 Hb_003209_130--Hb_000622_110 Hb_003209_130--Hb_004126_040 Hb_007545_010--Hb_000815_300 Hb_007545_010--Hb_011310_110 Hb_006970_020 Hb_006970_020 Hb_007545_010--Hb_006970_020 Hb_000139_080 Hb_000139_080 Hb_007545_010--Hb_000139_080 Hb_001021_010 Hb_001021_010 Hb_000389_030--Hb_001021_010 Hb_000389_030--Hb_004126_040 Hb_004525_040 Hb_004525_040 Hb_000389_030--Hb_004525_040 Hb_000009_060 Hb_000009_060 Hb_000389_030--Hb_000009_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.97508 4.3949 7.67594 12.9369 2.60321 3.66552
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.64751 2.99567 2.77244 5.57953 7.35801

CAGE analysis