Hb_004525_040

Information

Type -
Description -
Location Contig4525: 22118-24915
Sequence    

Annotation

kegg
ID pvu:PHAVU_003G2541000
description hypothetical protein
nr
ID XP_012070577.1
description PREDICTED: sugar transporter ERD6-like 6 [Jatropha curcas]
swissprot
ID Q9FRL3
description Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1
trembl
ID A0A067L4N8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05146 PE=3 SV=1
Gene Ontology
ID GO:0016021
description sugar transporter erd6-like 6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43222: 22185-44706 , PASA_asmbl_43229: 24119-30010
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004525_040 0.0 - - PREDICTED: sugar transporter ERD6-like 6 [Jatropha curcas]
2 Hb_000389_030 0.0772182772 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B [Jatropha curcas]
3 Hb_033152_070 0.0822318896 - - N-acetyl-gamma-glutamyl-phosphate reductase, putative [Ricinus communis]
4 Hb_001021_010 0.0824778253 - - PREDICTED: bifunctional protein FolD 2 [Jatropha curcas]
5 Hb_000256_230 0.0848607481 - - PREDICTED: uncharacterized protein LOC105637594 [Jatropha curcas]
6 Hb_004126_040 0.0852233315 - - conserved hypothetical protein [Ricinus communis]
7 Hb_010042_020 0.0873570834 - - UDP-n-acteylglucosamine pyrophosphorylase, putative [Ricinus communis]
8 Hb_001481_150 0.08897559 - - hypothetical protein POPTR_0001s15440g [Populus trichocarpa]
9 Hb_002902_130 0.0946210136 - - PREDICTED: molybdate-anion transporter [Jatropha curcas]
10 Hb_005701_120 0.0957553006 - - PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Cucumis sativus]
11 Hb_003052_180 0.0979182239 - - Diacylglycerol Cholinephosphotransferase [Ricinus communis]
12 Hb_003988_050 0.0994634014 - - PREDICTED: zinc finger protein-like 1 homolog [Jatropha curcas]
13 Hb_003998_040 0.1030291859 - - organic anion transporter, putative [Ricinus communis]
14 Hb_021576_070 0.1042004444 - - hypothetical protein PRUPE_ppa002736mg [Prunus persica]
15 Hb_000009_060 0.105356901 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B [Jatropha curcas]
16 Hb_000003_310 0.1071884636 - - PREDICTED: glycosyltransferase-like KOBITO 1 [Jatropha curcas]
17 Hb_000107_110 0.1073429786 - - nucleic acid binding protein, putative [Ricinus communis]
18 Hb_007765_040 0.107723148 - - Cytosolic enolase isoform 3 [Theobroma cacao]
19 Hb_019280_020 0.1081951674 - - PREDICTED: proline-rich receptor-like protein kinase PERK14 isoform X1 [Jatropha curcas]
20 Hb_000390_050 0.108571459 - - PREDICTED: GPCR-type G protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_004525_040 Hb_004525_040 Hb_000389_030 Hb_000389_030 Hb_004525_040--Hb_000389_030 Hb_033152_070 Hb_033152_070 Hb_004525_040--Hb_033152_070 Hb_001021_010 Hb_001021_010 Hb_004525_040--Hb_001021_010 Hb_000256_230 Hb_000256_230 Hb_004525_040--Hb_000256_230 Hb_004126_040 Hb_004126_040 Hb_004525_040--Hb_004126_040 Hb_010042_020 Hb_010042_020 Hb_004525_040--Hb_010042_020 Hb_000389_030--Hb_000256_230 Hb_000389_030--Hb_001021_010 Hb_000389_030--Hb_004126_040 Hb_000665_170 Hb_000665_170 Hb_000389_030--Hb_000665_170 Hb_000009_060 Hb_000009_060 Hb_000389_030--Hb_000009_060 Hb_033152_070--Hb_010042_020 Hb_003207_020 Hb_003207_020 Hb_033152_070--Hb_003207_020 Hb_000928_190 Hb_000928_190 Hb_033152_070--Hb_000928_190 Hb_003052_180 Hb_003052_180 Hb_033152_070--Hb_003052_180 Hb_000402_130 Hb_000402_130 Hb_033152_070--Hb_000402_130 Hb_001021_010--Hb_000009_060 Hb_001097_040 Hb_001097_040 Hb_001021_010--Hb_001097_040 Hb_003994_220 Hb_003994_220 Hb_001021_010--Hb_003994_220 Hb_000703_330 Hb_000703_330 Hb_001021_010--Hb_000703_330 Hb_000256_230--Hb_000665_170 Hb_003209_130 Hb_003209_130 Hb_000256_230--Hb_003209_130 Hb_000256_230--Hb_004126_040 Hb_000622_110 Hb_000622_110 Hb_000256_230--Hb_000622_110 Hb_002486_050 Hb_002486_050 Hb_000256_230--Hb_002486_050 Hb_004126_040--Hb_000665_170 Hb_004126_040--Hb_003209_130 Hb_004126_040--Hb_000622_110 Hb_003878_200 Hb_003878_200 Hb_004126_040--Hb_003878_200 Hb_010042_020--Hb_003207_020 Hb_010042_020--Hb_000928_190 Hb_001486_040 Hb_001486_040 Hb_010042_020--Hb_001486_040 Hb_000107_110 Hb_000107_110 Hb_010042_020--Hb_000107_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.56137 2.44091 4.42674 14.6054 2.80766 2.99705
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.0042 2.44857 2.75606 5.77865 5.33674

CAGE analysis