Hb_001021_010

Information

Type -
Description -
Location Contig1021: 2348-4589
Sequence    

Annotation

kegg
ID rcu:RCOM_1439680
description methylenetetrahydrofolate dehydrogenase, putative (EC:3.5.4.9)
nr
ID XP_012082722.1
description PREDICTED: bifunctional protein FolD 2 [Jatropha curcas]
swissprot
ID Q9LHH7
description Bifunctional protein FolD 2 OS=Arabidopsis thaliana GN=FOLD2 PE=2 SV=1
trembl
ID A0A067K8J8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13900 PE=3 SV=1
Gene Ontology
ID GO:0005829
description bifunctional protein 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001021_010 0.0 - - PREDICTED: bifunctional protein FolD 2 [Jatropha curcas]
2 Hb_000009_060 0.0585296897 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B [Jatropha curcas]
3 Hb_000389_030 0.0668899095 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B [Jatropha curcas]
4 Hb_001097_040 0.0790538886 - - PREDICTED: probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B [Jatropha curcas]
5 Hb_003994_220 0.0796384122 - - PREDICTED: V-type proton ATPase catalytic subunit A [Jatropha curcas]
6 Hb_000703_330 0.0813563426 - - conserved hypothetical protein [Ricinus communis]
7 Hb_004525_040 0.0824778253 - - PREDICTED: sugar transporter ERD6-like 6 [Jatropha curcas]
8 Hb_000256_230 0.0830831259 - - PREDICTED: uncharacterized protein LOC105637594 [Jatropha curcas]
9 Hb_031527_080 0.0855299139 - - utp-glucose-1-phosphate uridylyltransferase, putative [Ricinus communis]
10 Hb_003988_050 0.0865801048 - - PREDICTED: zinc finger protein-like 1 homolog [Jatropha curcas]
11 Hb_000701_030 0.0874522626 - - Sodium/hydrogen exchanger 6 -like protein [Gossypium arboreum]
12 Hb_002902_130 0.0888777048 - - PREDICTED: molybdate-anion transporter [Jatropha curcas]
13 Hb_003038_040 0.0928328812 transcription factor TF Family: TUB phosphoric diester hydrolase, putative [Ricinus communis]
14 Hb_001616_070 0.0963823443 - - PREDICTED: uncharacterized protein LOC105644365 [Jatropha curcas]
15 Hb_000165_080 0.0964003927 - - PREDICTED: multiple inositol polyphosphate phosphatase 1 isoform X1 [Jatropha curcas]
16 Hb_001051_070 0.0966724247 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
17 Hb_001703_050 0.0994471235 - - Transmembrane emp24 domain-containing protein 10 precursor, putative [Ricinus communis]
18 Hb_003097_140 0.1000148874 - - PREDICTED: glycosyltransferase-like KOBITO 1 [Jatropha curcas]
19 Hb_007416_070 0.1003148476 transcription factor TF Family: B3 hypothetical protein JCGZ_07038 [Jatropha curcas]
20 Hb_007137_050 0.1008001476 - - Uncharacterized protein isoform 1 [Theobroma cacao]

Gene co-expression network

sample Hb_001021_010 Hb_001021_010 Hb_000009_060 Hb_000009_060 Hb_001021_010--Hb_000009_060 Hb_000389_030 Hb_000389_030 Hb_001021_010--Hb_000389_030 Hb_001097_040 Hb_001097_040 Hb_001021_010--Hb_001097_040 Hb_003994_220 Hb_003994_220 Hb_001021_010--Hb_003994_220 Hb_000703_330 Hb_000703_330 Hb_001021_010--Hb_000703_330 Hb_004525_040 Hb_004525_040 Hb_001021_010--Hb_004525_040 Hb_001616_070 Hb_001616_070 Hb_000009_060--Hb_001616_070 Hb_000009_060--Hb_000703_330 Hb_018845_010 Hb_018845_010 Hb_000009_060--Hb_018845_010 Hb_007416_070 Hb_007416_070 Hb_000009_060--Hb_007416_070 Hb_000009_060--Hb_000389_030 Hb_000256_230 Hb_000256_230 Hb_000389_030--Hb_000256_230 Hb_004126_040 Hb_004126_040 Hb_000389_030--Hb_004126_040 Hb_000665_170 Hb_000665_170 Hb_000389_030--Hb_000665_170 Hb_000389_030--Hb_004525_040 Hb_001085_080 Hb_001085_080 Hb_001097_040--Hb_001085_080 Hb_003038_040 Hb_003038_040 Hb_001097_040--Hb_003038_040 Hb_007137_050 Hb_007137_050 Hb_001097_040--Hb_007137_050 Hb_000023_300 Hb_000023_300 Hb_001097_040--Hb_000023_300 Hb_001159_030 Hb_001159_030 Hb_001097_040--Hb_001159_030 Hb_000152_700 Hb_000152_700 Hb_001097_040--Hb_000152_700 Hb_003994_220--Hb_003038_040 Hb_001703_050 Hb_001703_050 Hb_003994_220--Hb_001703_050 Hb_031527_080 Hb_031527_080 Hb_003994_220--Hb_031527_080 Hb_003097_140 Hb_003097_140 Hb_003994_220--Hb_003097_140 Hb_007416_210 Hb_007416_210 Hb_003994_220--Hb_007416_210 Hb_000703_330--Hb_007416_070 Hb_008289_040 Hb_008289_040 Hb_000703_330--Hb_008289_040 Hb_000197_190 Hb_000197_190 Hb_000703_330--Hb_000197_190 Hb_065968_010 Hb_065968_010 Hb_000703_330--Hb_065968_010 Hb_002639_030 Hb_002639_030 Hb_000703_330--Hb_002639_030 Hb_033152_070 Hb_033152_070 Hb_004525_040--Hb_033152_070 Hb_004525_040--Hb_000256_230 Hb_004525_040--Hb_004126_040 Hb_010042_020 Hb_010042_020 Hb_004525_040--Hb_010042_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.7993 11.1508 16.7758 40.1991 11.2452 9.35618
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.04914 8.12832 9.43249 26.313 15.927

CAGE analysis