Hb_001616_070

Information

Type -
Description -
Location Contig1616: 92025-96305
Sequence    

Annotation

kegg
ID pmum:103334280
description uncharacterized LOC103334280
nr
ID XP_012085064.1
description PREDICTED: uncharacterized protein LOC105644365 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JR49
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17515 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14490: 87813-91046 , PASA_asmbl_14492: 91965-92257
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001616_070 0.0 - - PREDICTED: uncharacterized protein LOC105644365 [Jatropha curcas]
2 Hb_000009_060 0.0523545335 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B [Jatropha curcas]
3 Hb_003683_130 0.0827155608 - - PREDICTED: enolase 1, chloroplastic [Jatropha curcas]
4 Hb_000703_330 0.0846374494 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000220_110 0.0849925592 - - fructose-bisphosphate aldolase, putative [Ricinus communis]
6 Hb_000197_190 0.0855224108 - - PREDICTED: diaminopimelate decarboxylase 2, chloroplastic-like [Jatropha curcas]
7 Hb_007416_070 0.0882389394 transcription factor TF Family: B3 hypothetical protein JCGZ_07038 [Jatropha curcas]
8 Hb_018845_010 0.091206236 - - PREDICTED: uncharacterized protein LOC105642055 [Jatropha curcas]
9 Hb_000260_400 0.0945238184 - - PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Jatropha curcas]
10 Hb_001021_010 0.0963823443 - - PREDICTED: bifunctional protein FolD 2 [Jatropha curcas]
11 Hb_000683_050 0.0978064485 - - PREDICTED: probable carbohydrate esterase At4g34215 [Jatropha curcas]
12 Hb_002028_190 0.0999877987 - - PREDICTED: 26S protease regulatory subunit 7-like [Jatropha curcas]
13 Hb_031527_080 0.1043379285 - - utp-glucose-1-phosphate uridylyltransferase, putative [Ricinus communis]
14 Hb_002317_010 0.1114698236 - - PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Jatropha curcas]
15 Hb_132101_010 0.1157960649 - - hypothetical protein B456_007G078100 [Gossypium raimondii]
16 Hb_000389_030 0.1159507182 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B [Jatropha curcas]
17 Hb_002687_200 0.116704319 - - conserved hypothetical protein [Ricinus communis]
18 Hb_003227_010 0.117097368 - - PREDICTED: dynamin-related protein 1E-like [Jatropha curcas]
19 Hb_002686_200 0.1175088674 - - glucosidase II beta subunit, putative [Ricinus communis]
20 Hb_065968_010 0.1179486679 - - PREDICTED: probable glycosyltransferase At3g07620 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_001616_070 Hb_001616_070 Hb_000009_060 Hb_000009_060 Hb_001616_070--Hb_000009_060 Hb_003683_130 Hb_003683_130 Hb_001616_070--Hb_003683_130 Hb_000703_330 Hb_000703_330 Hb_001616_070--Hb_000703_330 Hb_000220_110 Hb_000220_110 Hb_001616_070--Hb_000220_110 Hb_000197_190 Hb_000197_190 Hb_001616_070--Hb_000197_190 Hb_007416_070 Hb_007416_070 Hb_001616_070--Hb_007416_070 Hb_001021_010 Hb_001021_010 Hb_000009_060--Hb_001021_010 Hb_000009_060--Hb_000703_330 Hb_018845_010 Hb_018845_010 Hb_000009_060--Hb_018845_010 Hb_000009_060--Hb_007416_070 Hb_000389_030 Hb_000389_030 Hb_000009_060--Hb_000389_030 Hb_000260_400 Hb_000260_400 Hb_003683_130--Hb_000260_400 Hb_000365_200 Hb_000365_200 Hb_003683_130--Hb_000365_200 Hb_004297_090 Hb_004297_090 Hb_003683_130--Hb_004297_090 Hb_022092_010 Hb_022092_010 Hb_003683_130--Hb_022092_010 Hb_003683_130--Hb_000009_060 Hb_000703_330--Hb_007416_070 Hb_008289_040 Hb_008289_040 Hb_000703_330--Hb_008289_040 Hb_000703_330--Hb_000197_190 Hb_065968_010 Hb_065968_010 Hb_000703_330--Hb_065968_010 Hb_002639_030 Hb_002639_030 Hb_000703_330--Hb_002639_030 Hb_003227_010 Hb_003227_010 Hb_000220_110--Hb_003227_010 Hb_000139_140 Hb_000139_140 Hb_000220_110--Hb_000139_140 Hb_000172_280 Hb_000172_280 Hb_000220_110--Hb_000172_280 Hb_000683_050 Hb_000683_050 Hb_000220_110--Hb_000683_050 Hb_000220_110--Hb_003683_130 Hb_001799_060 Hb_001799_060 Hb_000197_190--Hb_001799_060 Hb_000197_190--Hb_065968_010 Hb_001957_010 Hb_001957_010 Hb_000197_190--Hb_001957_010 Hb_000197_190--Hb_000009_060 Hb_000197_190--Hb_007416_070 Hb_007416_070--Hb_000683_050 Hb_000367_180 Hb_000367_180 Hb_007416_070--Hb_000367_180 Hb_001811_170 Hb_001811_170 Hb_007416_070--Hb_001811_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.6926 1.16587 2.87682 4.39033 0.68095 0.867058
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.841354 0.862571 1.06177 3.68319 1.85892

CAGE analysis