Hb_000260_400

Information

Type -
Description -
Location Contig260: 254571-258675
Sequence    

Annotation

kegg
ID rcu:RCOM_1323170
description 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
nr
ID XP_012090969.1
description PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Jatropha curcas]
swissprot
ID P35493
description 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ricinus communis PE=1 SV=2
trembl
ID A0A067JP90
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00607 PE=4 SV=1
Gene Ontology
ID GO:0005737
description #NAME?

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26996: 254592-258960
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000260_400 0.0 - - PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Jatropha curcas]
2 Hb_005741_040 0.0629127784 - - PREDICTED: probable receptor-like protein kinase At1g49730 [Jatropha curcas]
3 Hb_003683_130 0.0776591368 - - PREDICTED: enolase 1, chloroplastic [Jatropha curcas]
4 Hb_002687_180 0.0891792153 - - PREDICTED: phytochrome-associated serine/threonine-protein phosphatase [Jatropha curcas]
5 Hb_002317_010 0.0916696502 - - PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Jatropha curcas]
6 Hb_001616_070 0.0945238184 - - PREDICTED: uncharacterized protein LOC105644365 [Jatropha curcas]
7 Hb_002687_200 0.0994638188 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000365_200 0.0999619649 - - PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Jatropha curcas]
9 Hb_000599_360 0.1008464994 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
10 Hb_009296_020 0.1015252256 desease resistance Gene Name: ATP-synt_ab_N PREDICTED: ATP synthase subunit beta, mitochondrial-like [Jatropha curcas]
11 Hb_003680_220 0.1015743485 - - hypothetical protein B456_002G243700 [Gossypium raimondii]
12 Hb_022092_010 0.1016638033 - - PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3-like [Jatropha curcas]
13 Hb_002552_040 0.1020200591 - - PREDICTED: uncharacterized protein LOC105641220 [Jatropha curcas]
14 Hb_001677_100 0.1020621502 - - delta1-pyrroline-5-carboxylate synthase [Manihot esculenta]
15 Hb_000101_390 0.1030082591 - - PREDICTED: mucin-5B [Jatropha curcas]
16 Hb_004297_090 0.103361658 - - PREDICTED: DNA polymerase epsilon catalytic subunit A [Jatropha curcas]
17 Hb_008725_270 0.1039105562 - - PREDICTED: probable protein disulfide-isomerase A6 [Jatropha curcas]
18 Hb_011716_010 0.1041591516 - - PREDICTED: probable protein arginine N-methyltransferase 1.2 [Jatropha curcas]
19 Hb_004218_130 0.1054081431 - - PREDICTED: uridine 5'-monophosphate synthase [Jatropha curcas]
20 Hb_002849_050 0.1060944725 - - PREDICTED: probable serine/threonine-protein kinase At1g01540 [Jatropha curcas]

Gene co-expression network

sample Hb_000260_400 Hb_000260_400 Hb_005741_040 Hb_005741_040 Hb_000260_400--Hb_005741_040 Hb_003683_130 Hb_003683_130 Hb_000260_400--Hb_003683_130 Hb_002687_180 Hb_002687_180 Hb_000260_400--Hb_002687_180 Hb_002317_010 Hb_002317_010 Hb_000260_400--Hb_002317_010 Hb_001616_070 Hb_001616_070 Hb_000260_400--Hb_001616_070 Hb_002687_200 Hb_002687_200 Hb_000260_400--Hb_002687_200 Hb_005741_040--Hb_002687_180 Hb_013726_050 Hb_013726_050 Hb_005741_040--Hb_013726_050 Hb_002849_050 Hb_002849_050 Hb_005741_040--Hb_002849_050 Hb_000599_360 Hb_000599_360 Hb_005741_040--Hb_000599_360 Hb_000317_110 Hb_000317_110 Hb_005741_040--Hb_000317_110 Hb_003683_130--Hb_001616_070 Hb_000365_200 Hb_000365_200 Hb_003683_130--Hb_000365_200 Hb_004297_090 Hb_004297_090 Hb_003683_130--Hb_004297_090 Hb_022092_010 Hb_022092_010 Hb_003683_130--Hb_022092_010 Hb_000009_060 Hb_000009_060 Hb_003683_130--Hb_000009_060 Hb_001279_190 Hb_001279_190 Hb_002687_180--Hb_001279_190 Hb_004228_120 Hb_004228_120 Hb_002687_180--Hb_004228_120 Hb_001250_050 Hb_001250_050 Hb_002687_180--Hb_001250_050 Hb_002304_050 Hb_002304_050 Hb_002687_180--Hb_002304_050 Hb_002552_040 Hb_002552_040 Hb_002687_180--Hb_002552_040 Hb_027760_060 Hb_027760_060 Hb_002317_010--Hb_027760_060 Hb_000029_170 Hb_000029_170 Hb_002317_010--Hb_000029_170 Hb_002317_010--Hb_002687_180 Hb_000101_390 Hb_000101_390 Hb_002317_010--Hb_000101_390 Hb_052135_020 Hb_052135_020 Hb_002317_010--Hb_052135_020 Hb_001616_070--Hb_000009_060 Hb_000703_330 Hb_000703_330 Hb_001616_070--Hb_000703_330 Hb_000220_110 Hb_000220_110 Hb_001616_070--Hb_000220_110 Hb_000197_190 Hb_000197_190 Hb_001616_070--Hb_000197_190 Hb_007416_070 Hb_007416_070 Hb_001616_070--Hb_007416_070 Hb_003680_220 Hb_003680_220 Hb_002687_200--Hb_003680_220 Hb_015884_020 Hb_015884_020 Hb_002687_200--Hb_015884_020 Hb_000007_090 Hb_000007_090 Hb_002687_200--Hb_000007_090 Hb_000027_200 Hb_000027_200 Hb_002687_200--Hb_000027_200 Hb_002687_200--Hb_002552_040 Hb_002942_230 Hb_002942_230 Hb_002687_200--Hb_002942_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
27.6392 42.6801 99.7214 99.1083 24.0809 17.9879
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
17.4293 16.9016 31.3306 87.5718 60.8375

CAGE analysis