Hb_005741_040

Information

Type -
Description -
Location Contig5741: 69278-84804
Sequence    

Annotation

kegg
ID pop:POPTR_0009s10330g
description hypothetical protein
nr
ID XP_012078959.1
description PREDICTED: probable receptor-like protein kinase At1g49730 [Jatropha curcas]
swissprot
ID Q9FX99
description Probable receptor-like protein kinase At1g49730 OS=Arabidopsis thaliana GN=At1g49730 PE=2 SV=1
trembl
ID A0A067K863
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14788 PE=3 SV=1
Gene Ontology
ID GO:0004674
description probable receptor-like protein kinase at1g49730

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49610: 72291-73044 , PASA_asmbl_49611: 73104-73739
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005741_040 0.0 - - PREDICTED: probable receptor-like protein kinase At1g49730 [Jatropha curcas]
2 Hb_000260_400 0.0629127784 - - PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Jatropha curcas]
3 Hb_002687_180 0.0668931033 - - PREDICTED: phytochrome-associated serine/threonine-protein phosphatase [Jatropha curcas]
4 Hb_013726_050 0.0705863805 - - PREDICTED: probable methyltransferase PMT13 [Jatropha curcas]
5 Hb_002849_050 0.0784553045 - - PREDICTED: probable serine/threonine-protein kinase At1g01540 [Jatropha curcas]
6 Hb_000599_360 0.080283883 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
7 Hb_000317_110 0.0843214247 - - PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial isoform X2 [Jatropha curcas]
8 Hb_002304_050 0.0857995861 - - pyruvate kinase, putative [Ricinus communis]
9 Hb_002445_030 0.0864590006 - - hypothetical protein JCGZ_12656 [Jatropha curcas]
10 Hb_001246_130 0.0874131792 - - PREDICTED: NAD-dependent malic enzyme 62 kDa isoform, mitochondrial [Jatropha curcas]
11 Hb_002552_040 0.0915593727 - - PREDICTED: uncharacterized protein LOC105641220 [Jatropha curcas]
12 Hb_002687_200 0.0956542794 - - conserved hypothetical protein [Ricinus communis]
13 Hb_006438_020 0.0964867996 - - PREDICTED: lysine--tRNA ligase-like [Populus euphratica]
14 Hb_000101_390 0.096759716 - - PREDICTED: mucin-5B [Jatropha curcas]
15 Hb_002317_010 0.0975299968 - - PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Jatropha curcas]
16 Hb_004724_390 0.0999550411 - - PREDICTED: nicalin-1-like [Populus euphratica]
17 Hb_006120_050 0.1000234451 - - PREDICTED: importin subunit alpha-4-like [Jatropha curcas]
18 Hb_000258_220 0.1008839209 - - PREDICTED: probable methyltransferase PMT2 isoform X2 [Jatropha curcas]
19 Hb_015884_020 0.1009305626 - - PREDICTED: protein PIR [Jatropha curcas]
20 Hb_001250_050 0.1024751688 - - PREDICTED: uncharacterized protein LOC105644623 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_005741_040 Hb_005741_040 Hb_000260_400 Hb_000260_400 Hb_005741_040--Hb_000260_400 Hb_002687_180 Hb_002687_180 Hb_005741_040--Hb_002687_180 Hb_013726_050 Hb_013726_050 Hb_005741_040--Hb_013726_050 Hb_002849_050 Hb_002849_050 Hb_005741_040--Hb_002849_050 Hb_000599_360 Hb_000599_360 Hb_005741_040--Hb_000599_360 Hb_000317_110 Hb_000317_110 Hb_005741_040--Hb_000317_110 Hb_003683_130 Hb_003683_130 Hb_000260_400--Hb_003683_130 Hb_000260_400--Hb_002687_180 Hb_002317_010 Hb_002317_010 Hb_000260_400--Hb_002317_010 Hb_001616_070 Hb_001616_070 Hb_000260_400--Hb_001616_070 Hb_002687_200 Hb_002687_200 Hb_000260_400--Hb_002687_200 Hb_001279_190 Hb_001279_190 Hb_002687_180--Hb_001279_190 Hb_004228_120 Hb_004228_120 Hb_002687_180--Hb_004228_120 Hb_001250_050 Hb_001250_050 Hb_002687_180--Hb_001250_050 Hb_002304_050 Hb_002304_050 Hb_002687_180--Hb_002304_050 Hb_002552_040 Hb_002552_040 Hb_002687_180--Hb_002552_040 Hb_002272_240 Hb_002272_240 Hb_013726_050--Hb_002272_240 Hb_013726_050--Hb_002304_050 Hb_013726_050--Hb_002687_180 Hb_002445_030 Hb_002445_030 Hb_013726_050--Hb_002445_030 Hb_116349_120 Hb_116349_120 Hb_013726_050--Hb_116349_120 Hb_024758_020 Hb_024758_020 Hb_002849_050--Hb_024758_020 Hb_011188_010 Hb_011188_010 Hb_002849_050--Hb_011188_010 Hb_009296_020 Hb_009296_020 Hb_002849_050--Hb_009296_020 Hb_001279_020 Hb_001279_020 Hb_002849_050--Hb_001279_020 Hb_001414_010 Hb_001414_010 Hb_002849_050--Hb_001414_010 Hb_158845_060 Hb_158845_060 Hb_000599_360--Hb_158845_060 Hb_021977_010 Hb_021977_010 Hb_000599_360--Hb_021977_010 Hb_003964_110 Hb_003964_110 Hb_000599_360--Hb_003964_110 Hb_160608_010 Hb_160608_010 Hb_000599_360--Hb_160608_010 Hb_080147_050 Hb_080147_050 Hb_000599_360--Hb_080147_050 Hb_023344_140 Hb_023344_140 Hb_000317_110--Hb_023344_140 Hb_000317_110--Hb_002687_180 Hb_000034_110 Hb_000034_110 Hb_000317_110--Hb_000034_110 Hb_004724_390 Hb_004724_390 Hb_000317_110--Hb_004724_390 Hb_005305_130 Hb_005305_130 Hb_000317_110--Hb_005305_130 Hb_000046_600 Hb_000046_600 Hb_000317_110--Hb_000046_600
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.672515 1.20353 2.10315 2.09307 0.559732 0.477703
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.361966 0.324138 0.715572 1.43645 1.42851

CAGE analysis