Hb_002639_030

Information

Type -
Description -
Location Contig2639: 26852-31775
Sequence    

Annotation

kegg
ID pop:POPTR_0002s01540g
description POPTRDRAFT_815978; prolyl oligopeptidase family protein
nr
ID XP_012073700.1
description PREDICTED: prolyl endopeptidase [Jatropha curcas]
swissprot
ID P48147
description Prolyl endopeptidase OS=Homo sapiens GN=PREP PE=1 SV=2
trembl
ID A0A067KL52
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08143 PE=4 SV=1
Gene Ontology
ID GO:0004252
description prolyl oligopeptidase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27550: 27006-31780
cDNA
(Sanger)
(ID:Location)		 030_E05.ab1: 27014-27872

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002639_030 0.0 - - PREDICTED: prolyl endopeptidase [Jatropha curcas]
2 Hb_002808_020 0.0725883422 - - PREDICTED: uncharacterized protein LOC105630318 isoform X1 [Jatropha curcas]
3 Hb_004837_280 0.0782667199 - - PREDICTED: uncharacterized protein LOC105648296 [Jatropha curcas]
4 Hb_000703_330 0.078671286 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002687_200 0.0793781857 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001226_130 0.0859180805 - - PREDICTED: aminopeptidase M1-like [Jatropha curcas]
7 Hb_002552_040 0.0876542329 - - PREDICTED: uncharacterized protein LOC105641220 [Jatropha curcas]
8 Hb_015099_030 0.0902214941 - - PREDICTED: uncharacterized protein LOC105649867 [Jatropha curcas]
9 Hb_000027_200 0.0913915902 - - PREDICTED: uncharacterized protein LOC105642055 [Jatropha curcas]
10 Hb_002392_020 0.0931738925 - - PREDICTED: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [Jatropha curcas]
11 Hb_000976_110 0.093522767 - - PREDICTED: KRR1 small subunit processome component homolog [Jatropha curcas]
12 Hb_002007_260 0.0946694177 - - beta-mannosidase, putative [Ricinus communis]
13 Hb_001587_030 0.0956959097 - - hypothetical protein JCGZ_09892 [Jatropha curcas]
14 Hb_000342_050 0.0959942542 - - hypothetical protein POPTR_0006s24710g [Populus trichocarpa]
15 Hb_002006_150 0.0965913959 - - copine, putative [Ricinus communis]
16 Hb_008289_040 0.0971360303 - - PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Jatropha curcas]
17 Hb_003777_030 0.0971846302 - - Exocyst complex component, putative [Ricinus communis]
18 Hb_002740_090 0.0972164772 - - PREDICTED: putative membrane-bound O-acyltransferase C24H6.01c [Jatropha curcas]
19 Hb_000101_390 0.0975589973 - - PREDICTED: mucin-5B [Jatropha curcas]
20 Hb_006970_020 0.0988118502 - - PREDICTED: DNA topoisomerase 6 subunit B [Jatropha curcas]

Gene co-expression network

sample Hb_002639_030 Hb_002639_030 Hb_002808_020 Hb_002808_020 Hb_002639_030--Hb_002808_020 Hb_004837_280 Hb_004837_280 Hb_002639_030--Hb_004837_280 Hb_000703_330 Hb_000703_330 Hb_002639_030--Hb_000703_330 Hb_002687_200 Hb_002687_200 Hb_002639_030--Hb_002687_200 Hb_001226_130 Hb_001226_130 Hb_002639_030--Hb_001226_130 Hb_002552_040 Hb_002552_040 Hb_002639_030--Hb_002552_040 Hb_103688_010 Hb_103688_010 Hb_002808_020--Hb_103688_010 Hb_002808_020--Hb_004837_280 Hb_000849_080 Hb_000849_080 Hb_002808_020--Hb_000849_080 Hb_002301_030 Hb_002301_030 Hb_002808_020--Hb_002301_030 Hb_002808_020--Hb_002687_200 Hb_000342_050 Hb_000342_050 Hb_004837_280--Hb_000342_050 Hb_001587_030 Hb_001587_030 Hb_004837_280--Hb_001587_030 Hb_002596_060 Hb_002596_060 Hb_004837_280--Hb_002596_060 Hb_107298_010 Hb_107298_010 Hb_004837_280--Hb_107298_010 Hb_001307_240 Hb_001307_240 Hb_004837_280--Hb_001307_240 Hb_004837_280--Hb_001226_130 Hb_007416_070 Hb_007416_070 Hb_000703_330--Hb_007416_070 Hb_008289_040 Hb_008289_040 Hb_000703_330--Hb_008289_040 Hb_000009_060 Hb_000009_060 Hb_000703_330--Hb_000009_060 Hb_000197_190 Hb_000197_190 Hb_000703_330--Hb_000197_190 Hb_065968_010 Hb_065968_010 Hb_000703_330--Hb_065968_010 Hb_003680_220 Hb_003680_220 Hb_002687_200--Hb_003680_220 Hb_015884_020 Hb_015884_020 Hb_002687_200--Hb_015884_020 Hb_000007_090 Hb_000007_090 Hb_002687_200--Hb_000007_090 Hb_000027_200 Hb_000027_200 Hb_002687_200--Hb_000027_200 Hb_002687_200--Hb_002552_040 Hb_002942_230 Hb_002942_230 Hb_002687_200--Hb_002942_230 Hb_001226_130--Hb_001587_030 Hb_000649_060 Hb_000649_060 Hb_001226_130--Hb_000649_060 Hb_001811_170 Hb_001811_170 Hb_001226_130--Hb_001811_170 Hb_001226_130--Hb_000342_050 Hb_000152_700 Hb_000152_700 Hb_001226_130--Hb_000152_700 Hb_000815_300 Hb_000815_300 Hb_002552_040--Hb_000815_300 Hb_002687_180 Hb_002687_180 Hb_002552_040--Hb_002687_180 Hb_004228_120 Hb_004228_120 Hb_002552_040--Hb_004228_120 Hb_001279_190 Hb_001279_190 Hb_002552_040--Hb_001279_190 Hb_002552_040--Hb_065968_010 Hb_006970_020 Hb_006970_020 Hb_002552_040--Hb_006970_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.50004 18.1858 34.3581 39.8062 10.5837 19.2403
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.2588 10.2709 9.31741 36.5083 32.4327

CAGE analysis