Hb_065968_010

Information

Type -
Description -
Location Contig65968: 83-1087
Sequence    

Annotation

kegg
ID pop:POPTR_0018s00290g
description POPTRDRAFT_1105799; hypothetical protein
nr
ID XP_012077355.1
description PREDICTED: probable glycosyltransferase At3g07620 isoform X2 [Jatropha curcas]
swissprot
ID Q9FFN2
description Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana GN=At5g03795 PE=3 SV=2
trembl
ID A0A067KDE3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07718 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_065968_010 0.0 - - PREDICTED: probable glycosyltransferase At3g07620 isoform X2 [Jatropha curcas]
2 Hb_002686_200 0.0605780349 - - glucosidase II beta subunit, putative [Ricinus communis]
3 Hb_003605_020 0.0641312661 - - exocyst complex component sec6, putative [Ricinus communis]
4 Hb_159809_070 0.0653874324 - - phospholipase A-2-activating protein, putative [Ricinus communis]
5 Hb_002552_040 0.0673843352 - - PREDICTED: uncharacterized protein LOC105641220 [Jatropha curcas]
6 Hb_074197_040 0.070152451 - - PREDICTED: SNARE-interacting protein KEULE [Jatropha curcas]
7 Hb_001957_010 0.0722565212 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g14410 isoform X1 [Jatropha curcas]
8 Hb_000395_280 0.0742276136 - - PREDICTED: thioredoxin-related transmembrane protein 2 [Vitis vinifera]
9 Hb_000367_180 0.0758111625 - - Heparanase-2, putative [Ricinus communis]
10 Hb_000197_190 0.0764982675 - - PREDICTED: diaminopimelate decarboxylase 2, chloroplastic-like [Jatropha curcas]
11 Hb_001269_130 0.0772319322 - - plant poly(A)+ RNA export protein, putative [Ricinus communis]
12 Hb_000078_140 0.077862596 - - PREDICTED: WD repeat-containing protein 11 [Jatropha curcas]
13 Hb_000703_330 0.0784963486 - - conserved hypothetical protein [Ricinus communis]
14 Hb_019654_020 0.0792840659 - - PREDICTED: T-complex protein 1 subunit beta [Jatropha curcas]
15 Hb_000979_130 0.0793969143 - - PREDICTED: phosphoglucomutase, cytoplasmic [Jatropha curcas]
16 Hb_001507_120 0.0796895783 - - transcription factor, putative [Ricinus communis]
17 Hb_000815_300 0.0802595499 - - Transmembrane emp24 domain-containing protein 10 precursor, putative [Ricinus communis]
18 Hb_008289_040 0.081220104 - - PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Jatropha curcas]
19 Hb_006824_010 0.0818120359 - - PREDICTED: origin of replication complex subunit 4 [Jatropha curcas]
20 Hb_000638_130 0.0821280813 - - PREDICTED: SAL1 phosphatase-like [Jatropha curcas]

Gene co-expression network

sample Hb_065968_010 Hb_065968_010 Hb_002686_200 Hb_002686_200 Hb_065968_010--Hb_002686_200 Hb_003605_020 Hb_003605_020 Hb_065968_010--Hb_003605_020 Hb_159809_070 Hb_159809_070 Hb_065968_010--Hb_159809_070 Hb_002552_040 Hb_002552_040 Hb_065968_010--Hb_002552_040 Hb_074197_040 Hb_074197_040 Hb_065968_010--Hb_074197_040 Hb_001957_010 Hb_001957_010 Hb_065968_010--Hb_001957_010 Hb_002686_200--Hb_159809_070 Hb_001269_600 Hb_001269_600 Hb_002686_200--Hb_001269_600 Hb_003159_050 Hb_003159_050 Hb_002686_200--Hb_003159_050 Hb_007933_040 Hb_007933_040 Hb_002686_200--Hb_007933_040 Hb_006824_010 Hb_006824_010 Hb_002686_200--Hb_006824_010 Hb_000395_280 Hb_000395_280 Hb_003605_020--Hb_000395_280 Hb_003605_020--Hb_001957_010 Hb_000174_260 Hb_000174_260 Hb_003605_020--Hb_000174_260 Hb_001269_130 Hb_001269_130 Hb_003605_020--Hb_001269_130 Hb_019654_020 Hb_019654_020 Hb_003605_020--Hb_019654_020 Hb_001227_120 Hb_001227_120 Hb_159809_070--Hb_001227_120 Hb_000078_140 Hb_000078_140 Hb_159809_070--Hb_000078_140 Hb_079526_040 Hb_079526_040 Hb_159809_070--Hb_079526_040 Hb_006189_020 Hb_006189_020 Hb_159809_070--Hb_006189_020 Hb_008304_020 Hb_008304_020 Hb_159809_070--Hb_008304_020 Hb_000815_300 Hb_000815_300 Hb_002552_040--Hb_000815_300 Hb_002687_180 Hb_002687_180 Hb_002552_040--Hb_002687_180 Hb_004228_120 Hb_004228_120 Hb_002552_040--Hb_004228_120 Hb_001279_190 Hb_001279_190 Hb_002552_040--Hb_001279_190 Hb_006970_020 Hb_006970_020 Hb_002552_040--Hb_006970_020 Hb_074197_040--Hb_000078_140 Hb_074197_040--Hb_000815_300 Hb_011377_040 Hb_011377_040 Hb_074197_040--Hb_011377_040 Hb_001301_270 Hb_001301_270 Hb_074197_040--Hb_001301_270 Hb_074197_040--Hb_006970_020 Hb_000197_190 Hb_000197_190 Hb_001957_010--Hb_000197_190 Hb_001507_120 Hb_001507_120 Hb_001957_010--Hb_001507_120 Hb_001957_010--Hb_000395_280 Hb_003994_030 Hb_003994_030 Hb_001957_010--Hb_003994_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.3496 6.83318 17.7365 19.6405 6.08885 6.22358
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.32369 7.36994 10.1909 16.3084 15.0306

CAGE analysis