Hb_000849_080

Information

Type -
Description -
Location Contig849: 100393-105601
Sequence    

Annotation

kegg
ID rcu:RCOM_1627110
description multicopper oxidase, putative (EC:1.10.3.3)
nr
ID XP_012084842.1
description PREDICTED: monocopper oxidase-like protein SKU5 isoform X1 [Jatropha curcas]
swissprot
ID Q9SU40
description Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1
trembl
ID A0A067LA42
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15107 PE=4 SV=1
Gene Ontology
ID GO:0005507
description monocopper oxidase-like protein sku5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60290: 100563-101462 , PASA_asmbl_60291: 100671-101456 , PASA_asmbl_60293: 101486-105555 , PASA_asmbl_60294: 104958-105347
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000849_080 0.0 - - PREDICTED: monocopper oxidase-like protein SKU5 isoform X1 [Jatropha curcas]
2 Hb_000140_450 0.0763337039 - - PREDICTED: calreticulin-3-like [Populus euphratica]
3 Hb_103688_010 0.0804906103 - - PREDICTED: sucrose-phosphatase 2-like [Jatropha curcas]
4 Hb_002007_260 0.0905091988 - - beta-mannosidase, putative [Ricinus communis]
5 Hb_002808_020 0.0969393061 - - PREDICTED: uncharacterized protein LOC105630318 isoform X1 [Jatropha curcas]
6 Hb_000575_100 0.09741863 - - PREDICTED: nephrocystin-3 isoform X2 [Jatropha curcas]
7 Hb_024570_040 0.0978072705 - - PREDICTED: clathrin interactor EPSIN 1 [Jatropha curcas]
8 Hb_188063_050 0.1038117577 - - PREDICTED: putative G3BP-like protein [Jatropha curcas]
9 Hb_135959_010 0.1064014494 - - hypothetical protein JCGZ_07060 [Jatropha curcas]
10 Hb_055062_040 0.107846664 - - ceramidase, putative [Ricinus communis]
11 Hb_002639_030 0.1082462632 - - PREDICTED: prolyl endopeptidase [Jatropha curcas]
12 Hb_004837_280 0.108864042 - - PREDICTED: uncharacterized protein LOC105648296 [Jatropha curcas]
13 Hb_012733_070 0.1110646758 - - PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial [Jatropha curcas]
14 Hb_001307_240 0.1128364634 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase SUVR2 isoform X2 [Jatropha curcas]
15 Hb_000122_080 0.1129981131 - - PREDICTED: staphylococcal-like nuclease CAN2 [Jatropha curcas]
16 Hb_008397_010 0.1146142321 - - PREDICTED: uncharacterized protein LOC105640192 isoform X2 [Jatropha curcas]
17 Hb_001733_030 0.1148887706 - - PREDICTED: uncharacterized protein LOC100261386 isoform X2 [Vitis vinifera]
18 Hb_001226_130 0.11506289 - - PREDICTED: aminopeptidase M1-like [Jatropha curcas]
19 Hb_002284_100 0.1151512445 - - ribophorin, putative [Ricinus communis]
20 Hb_000320_290 0.1152402035 - - PREDICTED: putative lactoylglutathione lyase [Jatropha curcas]

Gene co-expression network

sample Hb_000849_080 Hb_000849_080 Hb_000140_450 Hb_000140_450 Hb_000849_080--Hb_000140_450 Hb_103688_010 Hb_103688_010 Hb_000849_080--Hb_103688_010 Hb_002007_260 Hb_002007_260 Hb_000849_080--Hb_002007_260 Hb_002808_020 Hb_002808_020 Hb_000849_080--Hb_002808_020 Hb_000575_100 Hb_000575_100 Hb_000849_080--Hb_000575_100 Hb_024570_040 Hb_024570_040 Hb_000849_080--Hb_024570_040 Hb_031931_020 Hb_031931_020 Hb_000140_450--Hb_031931_020 Hb_073973_150 Hb_073973_150 Hb_000140_450--Hb_073973_150 Hb_000320_290 Hb_000320_290 Hb_000140_450--Hb_000320_290 Hb_001194_020 Hb_001194_020 Hb_000140_450--Hb_001194_020 Hb_000284_230 Hb_000284_230 Hb_000140_450--Hb_000284_230 Hb_103688_010--Hb_002808_020 Hb_135959_010 Hb_135959_010 Hb_103688_010--Hb_135959_010 Hb_103688_010--Hb_002007_260 Hb_001558_040 Hb_001558_040 Hb_103688_010--Hb_001558_040 Hb_000157_070 Hb_000157_070 Hb_103688_010--Hb_000157_070 Hb_001246_130 Hb_001246_130 Hb_002007_260--Hb_001246_130 Hb_010042_030 Hb_010042_030 Hb_002007_260--Hb_010042_030 Hb_001085_290 Hb_001085_290 Hb_002007_260--Hb_001085_290 Hb_001159_030 Hb_001159_030 Hb_002007_260--Hb_001159_030 Hb_002007_260--Hb_001558_040 Hb_030982_010 Hb_030982_010 Hb_002007_260--Hb_030982_010 Hb_002639_030 Hb_002639_030 Hb_002808_020--Hb_002639_030 Hb_004837_280 Hb_004837_280 Hb_002808_020--Hb_004837_280 Hb_002301_030 Hb_002301_030 Hb_002808_020--Hb_002301_030 Hb_002687_200 Hb_002687_200 Hb_002808_020--Hb_002687_200 Hb_055062_040 Hb_055062_040 Hb_000575_100--Hb_055062_040 Hb_004306_030 Hb_004306_030 Hb_000575_100--Hb_004306_030 Hb_002025_330 Hb_002025_330 Hb_000575_100--Hb_002025_330 Hb_004048_120 Hb_004048_120 Hb_000575_100--Hb_004048_120 Hb_003280_020 Hb_003280_020 Hb_000575_100--Hb_003280_020 Hb_002232_490 Hb_002232_490 Hb_024570_040--Hb_002232_490 Hb_002284_100 Hb_002284_100 Hb_024570_040--Hb_002284_100 Hb_002392_020 Hb_002392_020 Hb_024570_040--Hb_002392_020 Hb_000358_210 Hb_000358_210 Hb_024570_040--Hb_000358_210 Hb_009524_030 Hb_009524_030 Hb_024570_040--Hb_009524_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.76604 5.35717 9.01377 12.2645 6.52614 7.9425
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.93842 1.64155 2.24756 13.589 9.82707

CAGE analysis