Hb_001159_030

Information

Type -
Description -
Location Contig1159: 13192-17502
Sequence    

Annotation

kegg
ID rcu:RCOM_2117780
description zinc finger protein, putative
nr
ID XP_012066562.1
description PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]
swissprot
ID Q8VYP5
description Probable protein S-acyltransferase 14 OS=Arabidopsis thaliana GN=PAT14 PE=2 SV=1
trembl
ID A0A067LDI5
description S-acyltransferase OS=Jatropha curcas GN=JCGZ_24334 PE=3 SV=1
Gene Ontology
ID GO:0016740
description probable protein s-acyltransferase 14

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04764: 12854-17415 , PASA_asmbl_04765: 12854-18384
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001159_030 0.0 - - PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]
2 Hb_000085_260 0.0512081761 - - glycerophosphoryl diester phosphodiesterase, putative [Ricinus communis]
3 Hb_010042_030 0.0582811568 - - PREDICTED: UDP-N-acetylglucosamine diphosphorylase 1 [Jatropha curcas]
4 Hb_005062_110 0.0635041286 - - PREDICTED: transmembrane 9 superfamily member 1 [Jatropha curcas]
5 Hb_002007_260 0.0658225757 - - beta-mannosidase, putative [Ricinus communis]
6 Hb_003038_040 0.0733575886 transcription factor TF Family: TUB phosphoric diester hydrolase, putative [Ricinus communis]
7 Hb_001097_040 0.0783661316 - - PREDICTED: probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B [Jatropha curcas]
8 Hb_000320_290 0.0810432718 - - PREDICTED: putative lactoylglutathione lyase [Jatropha curcas]
9 Hb_000098_050 0.0837435716 - - BnaCnng11900D [Brassica napus]
10 Hb_000054_040 0.0840620744 - - PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [Jatropha curcas]
11 Hb_001558_040 0.0844765531 - - PREDICTED: GPI ethanolamine phosphate transferase 2 [Jatropha curcas]
12 Hb_001246_130 0.0850261414 - - PREDICTED: NAD-dependent malic enzyme 62 kDa isoform, mitochondrial [Jatropha curcas]
13 Hb_000205_280 0.0866749462 - - PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1 [Jatropha curcas]
14 Hb_000161_210 0.0884294327 - - PREDICTED: uncharacterized protein At5g49945-like [Jatropha curcas]
15 Hb_001085_080 0.0904214622 - - eukaryotic translation elongation factor 1-alpha [Hevea brasiliensis]
16 Hb_000579_130 0.0922310313 - - ubiquitin-protein ligase, putative [Ricinus communis]
17 Hb_000265_140 0.0929625 - - PREDICTED: transmembrane 9 superfamily member 12 [Jatropha curcas]
18 Hb_000701_030 0.0933073817 - - Sodium/hydrogen exchanger 6 -like protein [Gossypium arboreum]
19 Hb_007286_020 0.0944269919 - - hypothetical protein L484_010675 [Morus notabilis]
20 Hb_000359_190 0.094504732 - - PREDICTED: protein VACUOLELESS1 [Nicotiana sylvestris]

Gene co-expression network

sample Hb_001159_030 Hb_001159_030 Hb_000085_260 Hb_000085_260 Hb_001159_030--Hb_000085_260 Hb_010042_030 Hb_010042_030 Hb_001159_030--Hb_010042_030 Hb_005062_110 Hb_005062_110 Hb_001159_030--Hb_005062_110 Hb_002007_260 Hb_002007_260 Hb_001159_030--Hb_002007_260 Hb_003038_040 Hb_003038_040 Hb_001159_030--Hb_003038_040 Hb_001097_040 Hb_001097_040 Hb_001159_030--Hb_001097_040 Hb_000085_260--Hb_010042_030 Hb_000085_260--Hb_005062_110 Hb_000098_050 Hb_000098_050 Hb_000085_260--Hb_000098_050 Hb_000503_020 Hb_000503_020 Hb_000085_260--Hb_000503_020 Hb_000679_100 Hb_000679_100 Hb_000085_260--Hb_000679_100 Hb_010042_030--Hb_005062_110 Hb_010042_030--Hb_002007_260 Hb_000579_130 Hb_000579_130 Hb_010042_030--Hb_000579_130 Hb_000320_290 Hb_000320_290 Hb_010042_030--Hb_000320_290 Hb_005062_110--Hb_000503_020 Hb_000622_110 Hb_000622_110 Hb_005062_110--Hb_000622_110 Hb_002486_050 Hb_002486_050 Hb_005062_110--Hb_002486_050 Hb_001246_130 Hb_001246_130 Hb_002007_260--Hb_001246_130 Hb_001085_290 Hb_001085_290 Hb_002007_260--Hb_001085_290 Hb_001558_040 Hb_001558_040 Hb_002007_260--Hb_001558_040 Hb_030982_010 Hb_030982_010 Hb_002007_260--Hb_030982_010 Hb_003994_220 Hb_003994_220 Hb_003038_040--Hb_003994_220 Hb_000161_210 Hb_000161_210 Hb_003038_040--Hb_000161_210 Hb_003038_040--Hb_001097_040 Hb_065500_020 Hb_065500_020 Hb_003038_040--Hb_065500_020 Hb_003038_040--Hb_010042_030 Hb_001085_080 Hb_001085_080 Hb_001097_040--Hb_001085_080 Hb_007137_050 Hb_007137_050 Hb_001097_040--Hb_007137_050 Hb_000023_300 Hb_000023_300 Hb_001097_040--Hb_000023_300 Hb_000152_700 Hb_000152_700 Hb_001097_040--Hb_000152_700
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.71029 5.07281 5.21812 10.531 3.32814 4.21424
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.57854 1.24192 2.5548 6.59544 4.87084

CAGE analysis