Hb_132082_010

Information

Type -
Description -
Location Contig132082: 2254-2744
Sequence    

Annotation

kegg
ID rcu:RCOM_1768240
description ferrochelatase, putative (EC:4.99.1.1)
nr
ID CAN66837.1
description hypothetical protein VITISV_030895 [Vitis vinifera]
swissprot
ID A2Y3Q5
description Ferrochelatase-2, chloroplastic OS=Oryza sativa subsp. indica GN=HEMH PE=2 SV=2
trembl
ID A5AKE9
description Ferrochelatase OS=Vitis vinifera GN=VITISV_030895 PE=3 SV=1
Gene Ontology
ID GO:0004325
description ferrochelatase- chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_132082_010 0.0 - - hypothetical protein VITISV_030895 [Vitis vinifera]
2 Hb_003777_030 0.0720695649 - - Exocyst complex component, putative [Ricinus communis]
3 Hb_000342_170 0.0885037697 - - PREDICTED: uncharacterized protein LOC100807540 isoform X2 [Glycine max]
4 Hb_000665_170 0.0893830455 - - PREDICTED: probable beta-1,3-galactosyltransferase 10 [Jatropha curcas]
5 Hb_007545_010 0.0963157051 - - HIV-1 rev binding protein, hrbl, putative [Ricinus communis]
6 Hb_002739_120 0.1021559998 - - PREDICTED: zinc finger protein ZPR1-like [Jatropha curcas]
7 Hb_000926_340 0.1025868903 - - PREDICTED: EH domain-containing protein 1 isoform X1 [Jatropha curcas]
8 Hb_002687_200 0.1028021853 - - conserved hypothetical protein [Ricinus communis]
9 Hb_015099_030 0.1030348731 - - PREDICTED: uncharacterized protein LOC105649867 [Jatropha curcas]
10 Hb_000256_230 0.1049514651 - - PREDICTED: uncharacterized protein LOC105637594 [Jatropha curcas]
11 Hb_001250_050 0.1056878977 - - PREDICTED: uncharacterized protein LOC105644623 isoform X1 [Jatropha curcas]
12 Hb_000418_020 0.1062230215 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
13 Hb_001811_170 0.1062738439 - - dynamin, putative [Ricinus communis]
14 Hb_000579_130 0.1066749883 - - ubiquitin-protein ligase, putative [Ricinus communis]
15 Hb_000622_110 0.1074640221 - - cmp-sialic acid transporter, putative [Ricinus communis]
16 Hb_002639_030 0.1089053308 - - PREDICTED: prolyl endopeptidase [Jatropha curcas]
17 Hb_115137_010 0.1102104551 - - PREDICTED: probable protein S-acyltransferase 23 isoform X2 [Jatropha curcas]
18 Hb_011671_120 0.1118037771 - - hypothetical protein JCGZ_26275 [Jatropha curcas]
19 Hb_007137_050 0.1121643084 - - Uncharacterized protein isoform 1 [Theobroma cacao]
20 Hb_000027_200 0.112777951 - - PREDICTED: uncharacterized protein LOC105642055 [Jatropha curcas]

Gene co-expression network

sample Hb_132082_010 Hb_132082_010 Hb_003777_030 Hb_003777_030 Hb_132082_010--Hb_003777_030 Hb_000342_170 Hb_000342_170 Hb_132082_010--Hb_000342_170 Hb_000665_170 Hb_000665_170 Hb_132082_010--Hb_000665_170 Hb_007545_010 Hb_007545_010 Hb_132082_010--Hb_007545_010 Hb_002739_120 Hb_002739_120 Hb_132082_010--Hb_002739_120 Hb_000926_340 Hb_000926_340 Hb_132082_010--Hb_000926_340 Hb_003777_030--Hb_000665_170 Hb_001250_050 Hb_001250_050 Hb_003777_030--Hb_001250_050 Hb_003777_030--Hb_007545_010 Hb_000815_300 Hb_000815_300 Hb_003777_030--Hb_000815_300 Hb_000256_230 Hb_000256_230 Hb_003777_030--Hb_000256_230 Hb_000510_150 Hb_000510_150 Hb_000342_170--Hb_000510_150 Hb_000342_170--Hb_000665_170 Hb_000342_170--Hb_003777_030 Hb_000860_060 Hb_000860_060 Hb_000342_170--Hb_000860_060 Hb_002687_200 Hb_002687_200 Hb_000342_170--Hb_002687_200 Hb_000665_170--Hb_000256_230 Hb_010672_020 Hb_010672_020 Hb_000665_170--Hb_010672_020 Hb_003209_130 Hb_003209_130 Hb_000665_170--Hb_003209_130 Hb_000665_170--Hb_007545_010 Hb_000389_030 Hb_000389_030 Hb_000665_170--Hb_000389_030 Hb_007545_010--Hb_000815_300 Hb_011310_110 Hb_011310_110 Hb_007545_010--Hb_011310_110 Hb_006970_020 Hb_006970_020 Hb_007545_010--Hb_006970_020 Hb_000139_080 Hb_000139_080 Hb_007545_010--Hb_000139_080 Hb_002739_120--Hb_001250_050 Hb_001085_080 Hb_001085_080 Hb_002739_120--Hb_001085_080 Hb_002739_120--Hb_003777_030 Hb_000418_020 Hb_000418_020 Hb_002739_120--Hb_000418_020 Hb_000197_180 Hb_000197_180 Hb_002739_120--Hb_000197_180 Hb_001009_150 Hb_001009_150 Hb_002739_120--Hb_001009_150 Hb_000622_110 Hb_000622_110 Hb_000926_340--Hb_000622_110 Hb_004126_040 Hb_004126_040 Hb_000926_340--Hb_004126_040 Hb_000926_340--Hb_000418_020 Hb_000926_340--Hb_000256_230 Hb_002486_050 Hb_002486_050 Hb_000926_340--Hb_002486_050 Hb_000926_340--Hb_003209_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.34164 16.6716 18.8713 35.206 5.04381 12.4484
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.16948 9.07107 3.8152 16.5221 22.7055

CAGE analysis