Hb_000418_020

Information

Type -
Description -
Location Contig418: 32807-42152
Sequence    

Annotation

kegg
ID pop:POPTR_0008s12620g
description POPTRDRAFT_832745; thioredoxin family protein
nr
ID XP_012075680.1
description PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
swissprot
ID Q9ZU40
description Sulfhydryl oxidase 2 OS=Arabidopsis thaliana GN=QSOX2 PE=2 SV=2
trembl
ID A0A067KT04
description Sulfhydryl oxidase OS=Jatropha curcas GN=JCGZ_09267 PE=4 SV=1
Gene Ontology
ID GO:0005623
description sulfhydryl oxidase 2-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41305: 40293-40798 , PASA_asmbl_41306: 32944-41877 , PASA_asmbl_41307: 40018-40212 , PASA_asmbl_41308: 32944-41877
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000418_020 0.0 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
2 Hb_000256_230 0.0719637994 - - PREDICTED: uncharacterized protein LOC105637594 [Jatropha curcas]
3 Hb_000665_170 0.0749653504 - - PREDICTED: probable beta-1,3-galactosyltransferase 10 [Jatropha curcas]
4 Hb_002687_200 0.0794728317 - - conserved hypothetical protein [Ricinus communis]
5 Hb_021576_070 0.0814287119 - - hypothetical protein PRUPE_ppa002736mg [Prunus persica]
6 Hb_002739_120 0.0817246816 - - PREDICTED: zinc finger protein ZPR1-like [Jatropha curcas]
7 Hb_003777_030 0.0833684437 - - Exocyst complex component, putative [Ricinus communis]
8 Hb_015884_020 0.0835331178 - - PREDICTED: protein PIR [Jatropha curcas]
9 Hb_000389_030 0.0839723706 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B [Jatropha curcas]
10 Hb_002942_230 0.0872650331 - - PREDICTED: long chain base biosynthesis protein 2a [Populus euphratica]
11 Hb_000701_030 0.0878036866 - - Sodium/hydrogen exchanger 6 -like protein [Gossypium arboreum]
12 Hb_000254_070 0.0891216027 - - PREDICTED: protein disulfide isomerase-like 1-6 [Jatropha curcas]
13 Hb_014361_060 0.089487791 - - PREDICTED: probable prolyl 4-hydroxylase 9 [Jatropha curcas]
14 Hb_021977_010 0.0903195729 - - PREDICTED: leukotriene A-4 hydrolase homolog [Jatropha curcas]
15 Hb_000926_340 0.0906901438 - - PREDICTED: EH domain-containing protein 1 isoform X1 [Jatropha curcas]
16 Hb_002217_080 0.0923309063 - - PREDICTED: probable beta-1,3-galactosyltransferase 16 [Jatropha curcas]
17 Hb_001250_050 0.09541004 - - PREDICTED: uncharacterized protein LOC105644623 isoform X1 [Jatropha curcas]
18 Hb_003209_130 0.0957430282 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
19 Hb_004126_040 0.0960778183 - - conserved hypothetical protein [Ricinus communis]
20 Hb_183086_030 0.0976291891 - - GTPase-activating protein GYP7 [Gossypium arboreum]

Gene co-expression network

sample Hb_000418_020 Hb_000418_020 Hb_000256_230 Hb_000256_230 Hb_000418_020--Hb_000256_230 Hb_000665_170 Hb_000665_170 Hb_000418_020--Hb_000665_170 Hb_002687_200 Hb_002687_200 Hb_000418_020--Hb_002687_200 Hb_021576_070 Hb_021576_070 Hb_000418_020--Hb_021576_070 Hb_002739_120 Hb_002739_120 Hb_000418_020--Hb_002739_120 Hb_003777_030 Hb_003777_030 Hb_000418_020--Hb_003777_030 Hb_000256_230--Hb_000665_170 Hb_000389_030 Hb_000389_030 Hb_000256_230--Hb_000389_030 Hb_003209_130 Hb_003209_130 Hb_000256_230--Hb_003209_130 Hb_004126_040 Hb_004126_040 Hb_000256_230--Hb_004126_040 Hb_000622_110 Hb_000622_110 Hb_000256_230--Hb_000622_110 Hb_002486_050 Hb_002486_050 Hb_000256_230--Hb_002486_050 Hb_000665_170--Hb_003777_030 Hb_010672_020 Hb_010672_020 Hb_000665_170--Hb_010672_020 Hb_000665_170--Hb_003209_130 Hb_007545_010 Hb_007545_010 Hb_000665_170--Hb_007545_010 Hb_000665_170--Hb_000389_030 Hb_003680_220 Hb_003680_220 Hb_002687_200--Hb_003680_220 Hb_015884_020 Hb_015884_020 Hb_002687_200--Hb_015884_020 Hb_000007_090 Hb_000007_090 Hb_002687_200--Hb_000007_090 Hb_000027_200 Hb_000027_200 Hb_002687_200--Hb_000027_200 Hb_002552_040 Hb_002552_040 Hb_002687_200--Hb_002552_040 Hb_002942_230 Hb_002942_230 Hb_002687_200--Hb_002942_230 Hb_000152_710 Hb_000152_710 Hb_021576_070--Hb_000152_710 Hb_004109_050 Hb_004109_050 Hb_021576_070--Hb_004109_050 Hb_000701_030 Hb_000701_030 Hb_021576_070--Hb_000701_030 Hb_001216_110 Hb_001216_110 Hb_021576_070--Hb_001216_110 Hb_001754_020 Hb_001754_020 Hb_021576_070--Hb_001754_020 Hb_001250_050 Hb_001250_050 Hb_002739_120--Hb_001250_050 Hb_001085_080 Hb_001085_080 Hb_002739_120--Hb_001085_080 Hb_002739_120--Hb_003777_030 Hb_000197_180 Hb_000197_180 Hb_002739_120--Hb_000197_180 Hb_001009_150 Hb_001009_150 Hb_002739_120--Hb_001009_150 Hb_003777_030--Hb_001250_050 Hb_003777_030--Hb_007545_010 Hb_132082_010 Hb_132082_010 Hb_003777_030--Hb_132082_010 Hb_000815_300 Hb_000815_300 Hb_003777_030--Hb_000815_300 Hb_003777_030--Hb_000256_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.00901 4.37319 6.32895 12.0714 3.14232 2.42508
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.70938 2.19097 1.74483 5.77632 7.28091

CAGE analysis