Hb_000152_710

Information

Type -
Description -
Location Contig152: 583384-586830
Sequence    

Annotation

kegg
ID rcu:RCOM_1500400
description Glycerol-3-phosphate transporter, putative
nr
ID XP_012090443.1
description PREDICTED: putative glycerol-3-phosphate transporter 1 [Jatropha curcas]
swissprot
ID Q9C5L3
description Putative glycerol-3-phosphate transporter 1 OS=Arabidopsis thaliana GN=At3g47420 PE=2 SV=1
trembl
ID A0A067JHZ2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26254 PE=4 SV=1
Gene Ontology
ID GO:0016021
description glycerol-3-phosphate transporter 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13046: 583421-586742
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000152_710 0.0 - - PREDICTED: putative glycerol-3-phosphate transporter 1 [Jatropha curcas]
2 Hb_021576_070 0.0660960938 - - hypothetical protein PRUPE_ppa002736mg [Prunus persica]
3 Hb_004109_050 0.0814188484 - - PREDICTED: putative callose synthase 8 [Jatropha curcas]
4 Hb_007537_030 0.0966988198 - - PREDICTED: gamma aminobutyrate transaminase 3, chloroplastic [Jatropha curcas]
5 Hb_001545_130 0.1005915761 - - sur2 hydroxylase/desaturase, putative [Ricinus communis]
6 Hb_019280_020 0.1037445983 - - PREDICTED: proline-rich receptor-like protein kinase PERK14 isoform X1 [Jatropha curcas]
7 Hb_000494_030 0.1038107276 - - PREDICTED: uncharacterized protein LOC105643196 [Jatropha curcas]
8 Hb_000679_040 0.1065790365 - - Cellulose synthase 1 [Theobroma cacao]
9 Hb_001216_110 0.1075226847 - - PREDICTED: protein GPR107-like [Jatropha curcas]
10 Hb_000009_060 0.1120051305 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B [Jatropha curcas]
11 Hb_028639_030 0.1141429074 - - PREDICTED: transmembrane 9 superfamily member 2-like [Jatropha curcas]
12 Hb_000062_530 0.1144591797 - - PREDICTED: GDP-mannose transporter GONST3-like [Populus euphratica]
13 Hb_003929_180 0.1149287998 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g17430 isoform X1 [Glycine max]
14 Hb_006351_020 0.1154047552 - - PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Jatropha curcas]
15 Hb_000570_020 0.1160463525 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9H isoform X1 [Jatropha curcas]
16 Hb_004030_060 0.1189394634 - - receptor protein kinase zmpk1, putative [Ricinus communis]
17 Hb_147245_010 0.1200291419 - - casein kinase, putative [Ricinus communis]
18 Hb_018845_010 0.1208201072 - - PREDICTED: uncharacterized protein LOC105642055 [Jatropha curcas]
19 Hb_004326_010 0.1216661418 - - cationic amino acid transporter, putative [Ricinus communis]
20 Hb_001754_020 0.1227033207 - - PREDICTED: kinesin-13A isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000152_710 Hb_000152_710 Hb_021576_070 Hb_021576_070 Hb_000152_710--Hb_021576_070 Hb_004109_050 Hb_004109_050 Hb_000152_710--Hb_004109_050 Hb_007537_030 Hb_007537_030 Hb_000152_710--Hb_007537_030 Hb_001545_130 Hb_001545_130 Hb_000152_710--Hb_001545_130 Hb_019280_020 Hb_019280_020 Hb_000152_710--Hb_019280_020 Hb_000494_030 Hb_000494_030 Hb_000152_710--Hb_000494_030 Hb_021576_070--Hb_004109_050 Hb_000701_030 Hb_000701_030 Hb_021576_070--Hb_000701_030 Hb_001216_110 Hb_001216_110 Hb_021576_070--Hb_001216_110 Hb_000418_020 Hb_000418_020 Hb_021576_070--Hb_000418_020 Hb_001754_020 Hb_001754_020 Hb_021576_070--Hb_001754_020 Hb_004109_050--Hb_001754_020 Hb_004109_050--Hb_001545_130 Hb_000570_020 Hb_000570_020 Hb_004109_050--Hb_000570_020 Hb_000395_110 Hb_000395_110 Hb_004109_050--Hb_000395_110 Hb_007537_030--Hb_000570_020 Hb_000157_140 Hb_000157_140 Hb_007537_030--Hb_000157_140 Hb_004030_060 Hb_004030_060 Hb_007537_030--Hb_004030_060 Hb_018845_010 Hb_018845_010 Hb_007537_030--Hb_018845_010 Hb_007537_030--Hb_021576_070 Hb_004326_010 Hb_004326_010 Hb_007537_030--Hb_004326_010 Hb_004218_130 Hb_004218_130 Hb_001545_130--Hb_004218_130 Hb_147245_010 Hb_147245_010 Hb_001545_130--Hb_147245_010 Hb_000003_030 Hb_000003_030 Hb_001545_130--Hb_000003_030 Hb_006351_020 Hb_006351_020 Hb_001545_130--Hb_006351_020 Hb_004032_210 Hb_004032_210 Hb_001545_130--Hb_004032_210 Hb_012362_030 Hb_012362_030 Hb_019280_020--Hb_012362_030 Hb_001481_150 Hb_001481_150 Hb_019280_020--Hb_001481_150 Hb_029510_100 Hb_029510_100 Hb_019280_020--Hb_029510_100 Hb_033152_070 Hb_033152_070 Hb_019280_020--Hb_033152_070 Hb_004525_040 Hb_004525_040 Hb_019280_020--Hb_004525_040 Hb_000494_030--Hb_000701_030 Hb_000683_050 Hb_000683_050 Hb_000494_030--Hb_000683_050 Hb_000494_030--Hb_004030_060 Hb_010390_010 Hb_010390_010 Hb_000494_030--Hb_010390_010 Hb_000494_030--Hb_021576_070 Hb_007416_070 Hb_007416_070 Hb_000494_030--Hb_007416_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.00263 4.4498 6.2504 15.9874 2.25769 1.54078
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.76518 1.47907 3.82946 6.87564 6.63006

CAGE analysis