Hb_003847_040

Information

Type -
Description -
Location Contig3847: 24226-29029
Sequence    

Annotation

kegg
ID rcu:RCOM_1122480
description adenosine diphosphatase, putative (EC:3.6.1.15)
nr
ID XP_002525470.1
description adenosine diphosphatase, putative [Ricinus communis]
swissprot
ID Q9SPM5
description Apyrase 2 OS=Arabidopsis thaliana GN=APY2 PE=1 SV=1
trembl
ID B9SHK1
description Adenosine diphosphatase, putative OS=Ricinus communis GN=RCOM_1122480 PE=3 SV=1
Gene Ontology
ID GO:0017111
description apyrase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38715: 24243-28975 , PASA_asmbl_38716: 30004-35857
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003847_040 0.0 - - adenosine diphosphatase, putative [Ricinus communis]
2 Hb_000638_060 0.0870151523 - - PREDICTED: probable methyltransferase PMT26 [Jatropha curcas]
3 Hb_001411_130 0.0887676427 - - PREDICTED: uncharacterized protein LOC105631354 isoform X1 [Jatropha curcas]
4 Hb_026549_070 0.0892505844 - - PREDICTED: UDP-glucuronic acid decarboxylase 1 [Jatropha curcas]
5 Hb_000959_300 0.0964304067 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming] isoform X2 [Jatropha curcas]
6 Hb_001195_660 0.0964406301 - - metalloendopeptidase, putative [Ricinus communis]
7 Hb_000414_080 0.098536796 - - PREDICTED: triosephosphate isomerase, chloroplastic [Jatropha curcas]
8 Hb_002942_230 0.0987507884 - - PREDICTED: long chain base biosynthesis protein 2a [Populus euphratica]
9 Hb_003175_070 0.1020504709 - - pyrophosphate-dependent phosphofructokinase, partial [Hevea brasiliensis]
10 Hb_000107_250 0.1064557452 - - voltage-gated clc-type chloride channel, putative [Ricinus communis]
11 Hb_014497_010 0.1069533561 - - PREDICTED: uncharacterized protein LOC105635153 [Jatropha curcas]
12 Hb_000000_310 0.1094087253 - - metalloendopeptidase, putative [Ricinus communis]
13 Hb_002217_080 0.1096393807 - - PREDICTED: probable beta-1,3-galactosyltransferase 16 [Jatropha curcas]
14 Hb_006120_060 0.1100519958 - - O-acetyltransferase family protein isoform 1 [Theobroma cacao]
15 Hb_009079_050 0.1127181135 - - PREDICTED: V-type proton ATPase subunit a3-like [Jatropha curcas]
16 Hb_000445_370 0.1141078063 - - PREDICTED: probable methyltransferase PMT24 [Jatropha curcas]
17 Hb_002675_080 0.1143127254 - - PREDICTED: uncharacterized protein LOC105634950 [Jatropha curcas]
18 Hb_001865_100 0.1144686945 - - PREDICTED: ACT domain-containing protein ACR9 [Jatropha curcas]
19 Hb_000283_140 0.1163607611 - - PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Jatropha curcas]
20 Hb_005074_040 0.1166796609 - - ATP binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_003847_040 Hb_003847_040 Hb_000638_060 Hb_000638_060 Hb_003847_040--Hb_000638_060 Hb_001411_130 Hb_001411_130 Hb_003847_040--Hb_001411_130 Hb_026549_070 Hb_026549_070 Hb_003847_040--Hb_026549_070 Hb_000959_300 Hb_000959_300 Hb_003847_040--Hb_000959_300 Hb_001195_660 Hb_001195_660 Hb_003847_040--Hb_001195_660 Hb_000414_080 Hb_000414_080 Hb_003847_040--Hb_000414_080 Hb_000283_140 Hb_000283_140 Hb_000638_060--Hb_000283_140 Hb_002217_320 Hb_002217_320 Hb_000638_060--Hb_002217_320 Hb_000570_020 Hb_000570_020 Hb_000638_060--Hb_000570_020 Hb_012807_150 Hb_012807_150 Hb_000638_060--Hb_012807_150 Hb_006120_060 Hb_006120_060 Hb_000638_060--Hb_006120_060 Hb_002942_230 Hb_002942_230 Hb_001411_130--Hb_002942_230 Hb_001279_020 Hb_001279_020 Hb_001411_130--Hb_001279_020 Hb_001411_130--Hb_000959_300 Hb_002217_080 Hb_002217_080 Hb_001411_130--Hb_002217_080 Hb_029552_020 Hb_029552_020 Hb_001411_130--Hb_029552_020 Hb_000139_300 Hb_000139_300 Hb_026549_070--Hb_000139_300 Hb_004306_110 Hb_004306_110 Hb_026549_070--Hb_004306_110 Hb_009079_050 Hb_009079_050 Hb_026549_070--Hb_009079_050 Hb_002164_020 Hb_002164_020 Hb_026549_070--Hb_002164_020 Hb_026549_070--Hb_001195_660 Hb_002488_010 Hb_002488_010 Hb_000959_300--Hb_002488_010 Hb_001969_140 Hb_001969_140 Hb_000959_300--Hb_001969_140 Hb_000959_300--Hb_002942_230 Hb_000167_040 Hb_000167_040 Hb_000959_300--Hb_000167_040 Hb_001195_660--Hb_000283_140 Hb_001195_660--Hb_009079_050 Hb_003582_090 Hb_003582_090 Hb_001195_660--Hb_003582_090 Hb_001195_660--Hb_000139_300 Hb_000487_370 Hb_000487_370 Hb_000414_080--Hb_000487_370 Hb_000510_190 Hb_000510_190 Hb_000414_080--Hb_000510_190 Hb_002249_080 Hb_002249_080 Hb_000414_080--Hb_002249_080 Hb_000422_080 Hb_000422_080 Hb_000414_080--Hb_000422_080 Hb_003175_070 Hb_003175_070 Hb_000414_080--Hb_003175_070 Hb_002374_450 Hb_002374_450 Hb_000414_080--Hb_002374_450
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.49275 8.86606 20.5073 24.9436 6.7102 2.86871
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.61082 2.78919 4.82107 6.94679 23.8277

CAGE analysis