Hb_012754_010

Information

Type -
Description -
Location Contig12754: 20225-21291
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012754_010 0.0 - - -
2 Hb_003089_030 0.1878444547 - - 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis]
3 Hb_005568_090 0.2074985346 - - WD-repeat protein, putative [Ricinus communis]
4 Hb_002483_010 0.2106215226 transcription factor TF Family: IWS1 conserved hypothetical protein [Ricinus communis]
5 Hb_021530_010 0.2116300826 - - PREDICTED: la protein 1 [Jatropha curcas]
6 Hb_003266_020 0.2148769691 - - PREDICTED: protein trichome birefringence-like 11 [Jatropha curcas]
7 Hb_000343_150 0.2173696686 - - PREDICTED: MAR-binding filament-like protein 1-1 [Jatropha curcas]
8 Hb_004267_060 0.2197766746 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
9 Hb_004236_030 0.2239660701 - - unknown [Lotus japonicus]
10 Hb_007576_230 0.2242740863 - - hypothetical protein JCGZ_25616 [Jatropha curcas]
11 Hb_005610_080 0.2246443422 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001558_060 0.2278370956 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 17 isoform X2 [Jatropha curcas]
13 Hb_075203_010 0.2296025623 - - PREDICTED: calcium-dependent protein kinase SK5 isoform X1 [Jatropha curcas]
14 Hb_004319_070 0.2296160804 - - hypothetical protein RCOM_0852460 [Ricinus communis]
15 Hb_001369_030 0.2306074064 - - PREDICTED: ceramide kinase isoform X1 [Jatropha curcas]
16 Hb_158445_020 0.2325120719 - - conserved hypothetical protein [Ricinus communis]
17 Hb_003839_010 0.2325989048 - - PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Elaeis guineensis]
18 Hb_007982_050 0.2333413079 - - PREDICTED: somatic embryogenesis receptor kinase 2-like [Jatropha curcas]
19 Hb_005054_190 0.2342142044 - - PREDICTED: uncharacterized protein LOC105646630 isoform X1 [Jatropha curcas]
20 Hb_001373_160 0.234371697 - - hypothetical protein JCGZ_16907 [Jatropha curcas]

Gene co-expression network

sample Hb_012754_010 Hb_012754_010 Hb_003089_030 Hb_003089_030 Hb_012754_010--Hb_003089_030 Hb_005568_090 Hb_005568_090 Hb_012754_010--Hb_005568_090 Hb_002483_010 Hb_002483_010 Hb_012754_010--Hb_002483_010 Hb_021530_010 Hb_021530_010 Hb_012754_010--Hb_021530_010 Hb_003266_020 Hb_003266_020 Hb_012754_010--Hb_003266_020 Hb_000343_150 Hb_000343_150 Hb_012754_010--Hb_000343_150 Hb_001565_060 Hb_001565_060 Hb_003089_030--Hb_001565_060 Hb_007576_220 Hb_007576_220 Hb_003089_030--Hb_007576_220 Hb_004236_010 Hb_004236_010 Hb_003089_030--Hb_004236_010 Hb_007576_230 Hb_007576_230 Hb_003089_030--Hb_007576_230 Hb_011161_020 Hb_011161_020 Hb_003089_030--Hb_011161_020 Hb_000122_220 Hb_000122_220 Hb_003089_030--Hb_000122_220 Hb_000165_110 Hb_000165_110 Hb_005568_090--Hb_000165_110 Hb_000058_050 Hb_000058_050 Hb_005568_090--Hb_000058_050 Hb_000890_010 Hb_000890_010 Hb_005568_090--Hb_000890_010 Hb_011609_010 Hb_011609_010 Hb_005568_090--Hb_011609_010 Hb_000189_390 Hb_000189_390 Hb_005568_090--Hb_000189_390 Hb_002609_190 Hb_002609_190 Hb_005568_090--Hb_002609_190 Hb_000086_500 Hb_000086_500 Hb_002483_010--Hb_000086_500 Hb_008062_050 Hb_008062_050 Hb_002483_010--Hb_008062_050 Hb_000787_150 Hb_000787_150 Hb_002483_010--Hb_000787_150 Hb_000023_320 Hb_000023_320 Hb_002483_010--Hb_000023_320 Hb_000926_010 Hb_000926_010 Hb_002483_010--Hb_000926_010 Hb_143766_110 Hb_143766_110 Hb_002483_010--Hb_143766_110 Hb_005610_080 Hb_005610_080 Hb_021530_010--Hb_005610_080 Hb_006132_040 Hb_006132_040 Hb_021530_010--Hb_006132_040 Hb_130389_010 Hb_130389_010 Hb_021530_010--Hb_130389_010 Hb_004236_030 Hb_004236_030 Hb_021530_010--Hb_004236_030 Hb_005054_310 Hb_005054_310 Hb_021530_010--Hb_005054_310 Hb_003430_030 Hb_003430_030 Hb_021530_010--Hb_003430_030 Hb_002968_070 Hb_002968_070 Hb_003266_020--Hb_002968_070 Hb_005883_110 Hb_005883_110 Hb_003266_020--Hb_005883_110 Hb_001953_120 Hb_001953_120 Hb_003266_020--Hb_001953_120 Hb_012940_040 Hb_012940_040 Hb_003266_020--Hb_012940_040 Hb_015183_100 Hb_015183_100 Hb_003266_020--Hb_015183_100 Hb_088144_020 Hb_088144_020 Hb_003266_020--Hb_088144_020 Hb_001558_060 Hb_001558_060 Hb_000343_150--Hb_001558_060 Hb_008165_030 Hb_008165_030 Hb_000343_150--Hb_008165_030 Hb_013405_150 Hb_013405_150 Hb_000343_150--Hb_013405_150 Hb_000343_150--Hb_004236_010 Hb_000723_110 Hb_000723_110 Hb_000343_150--Hb_000723_110 Hb_003605_050 Hb_003605_050 Hb_000343_150--Hb_003605_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.420833 0.522368 0.713722 0.0536629 0.143421 0.136491
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.118612 0 0.160233 0.346435 0.177039

CAGE analysis