Hb_003089_030

Information

Type -
Description -
Location Contig3089: 55815-57125
Sequence    

Annotation

kegg
ID rcu:RCOM_0640170
description 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative (EC:2.3.1.150)
nr
ID XP_002533732.1
description 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis]
swissprot
ID Q70PR7
description Vinorine synthase OS=Rauvolfia serpentina GN=ACT PE=1 SV=2
trembl
ID B9T663
description 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative OS=Ricinus communis GN=RCOM_0640170 PE=4 SV=1
Gene Ontology
ID GO:0047180
description vinorine synthase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003089_030 0.0 - - 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis]
2 Hb_001565_060 0.0891409568 - - PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial [Jatropha curcas]
3 Hb_007576_220 0.1177814843 - - PREDICTED: kanadaptin [Jatropha curcas]
4 Hb_004236_010 0.11833595 - - PREDICTED: probable mitochondrial-processing peptidase subunit beta [Jatropha curcas]
5 Hb_007576_230 0.1226137656 - - hypothetical protein JCGZ_25616 [Jatropha curcas]
6 Hb_011161_020 0.125292945 - - PREDICTED: DIS3-like exonuclease 2 [Jatropha curcas]
7 Hb_000122_220 0.126635333 - - Prenylated Rab acceptor protein, putative [Ricinus communis]
8 Hb_000086_050 0.1266654059 - - PREDICTED: structural maintenance of chromosomes protein 1 [Jatropha curcas]
9 Hb_003992_180 0.1273426022 - - PREDICTED: methyl-CpG-binding domain-containing protein 11 isoform X1 [Jatropha curcas]
10 Hb_005054_190 0.127674712 - - PREDICTED: uncharacterized protein LOC105646630 isoform X1 [Jatropha curcas]
11 Hb_000343_150 0.1282606107 - - PREDICTED: MAR-binding filament-like protein 1-1 [Jatropha curcas]
12 Hb_000869_030 0.1318361895 transcription factor TF Family: Pseudo ARR-B PREDICTED: two-component response regulator-like APRR5 isoform X1 [Jatropha curcas]
13 Hb_128695_030 0.1325551348 - - heat shock protein, putative [Ricinus communis]
14 Hb_005610_080 0.1336308744 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000926_010 0.136731443 - - PREDICTED: uncharacterized protein LOC105632975 [Jatropha curcas]
16 Hb_012082_010 0.1369491638 - - PREDICTED: transcription factor GTE4 isoform X1 [Jatropha curcas]
17 Hb_000574_420 0.1381123202 - - PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Jatropha curcas]
18 Hb_000227_310 0.1383285044 - - PREDICTED: cyclin-T1-4-like isoform X2 [Jatropha curcas]
19 Hb_002903_140 0.1398547117 - - PREDICTED: uncharacterized protein LOC105649513 [Jatropha curcas]
20 Hb_007283_030 0.1410723935 - - PREDICTED: pre-mRNA-processing protein 40C-like [Malus domestica]

Gene co-expression network

sample Hb_003089_030 Hb_003089_030 Hb_001565_060 Hb_001565_060 Hb_003089_030--Hb_001565_060 Hb_007576_220 Hb_007576_220 Hb_003089_030--Hb_007576_220 Hb_004236_010 Hb_004236_010 Hb_003089_030--Hb_004236_010 Hb_007576_230 Hb_007576_230 Hb_003089_030--Hb_007576_230 Hb_011161_020 Hb_011161_020 Hb_003089_030--Hb_011161_020 Hb_000122_220 Hb_000122_220 Hb_003089_030--Hb_000122_220 Hb_001565_060--Hb_000122_220 Hb_128695_030 Hb_128695_030 Hb_001565_060--Hb_128695_030 Hb_001565_020 Hb_001565_020 Hb_001565_060--Hb_001565_020 Hb_001454_220 Hb_001454_220 Hb_001565_060--Hb_001454_220 Hb_000343_150 Hb_000343_150 Hb_001565_060--Hb_000343_150 Hb_009449_090 Hb_009449_090 Hb_007576_220--Hb_009449_090 Hb_007576_220--Hb_007576_230 Hb_155159_010 Hb_155159_010 Hb_007576_220--Hb_155159_010 Hb_005539_040 Hb_005539_040 Hb_007576_220--Hb_005539_040 Hb_000086_050 Hb_000086_050 Hb_007576_220--Hb_000086_050 Hb_002073_280 Hb_002073_280 Hb_007576_220--Hb_002073_280 Hb_000645_130 Hb_000645_130 Hb_004236_010--Hb_000645_130 Hb_009302_030 Hb_009302_030 Hb_004236_010--Hb_009302_030 Hb_000500_300 Hb_000500_300 Hb_004236_010--Hb_000500_300 Hb_004659_090 Hb_004659_090 Hb_004236_010--Hb_004659_090 Hb_000189_630 Hb_000189_630 Hb_004236_010--Hb_000189_630 Hb_007283_030 Hb_007283_030 Hb_004236_010--Hb_007283_030 Hb_007818_040 Hb_007818_040 Hb_007576_230--Hb_007818_040 Hb_007576_230--Hb_007283_030 Hb_007576_230--Hb_000086_050 Hb_007576_230--Hb_009449_090 Hb_000300_250 Hb_000300_250 Hb_007576_230--Hb_000300_250 Hb_000574_420 Hb_000574_420 Hb_011161_020--Hb_000574_420 Hb_006185_060 Hb_006185_060 Hb_011161_020--Hb_006185_060 Hb_003047_020 Hb_003047_020 Hb_011161_020--Hb_003047_020 Hb_011161_020--Hb_009302_030 Hb_011161_020--Hb_004236_010 Hb_011161_020--Hb_000122_220 Hb_000358_200 Hb_000358_200 Hb_000122_220--Hb_000358_200 Hb_000122_220--Hb_004659_090 Hb_000122_220--Hb_006185_060 Hb_001231_090 Hb_001231_090 Hb_000122_220--Hb_001231_090 Hb_002687_090 Hb_002687_090 Hb_000122_220--Hb_002687_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.323528 0.598096 0.421087 0.128043 0.248363 0.140571
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0730553 0.028735 0.161052 0.172397 0.238987

CAGE analysis