Hb_128695_030

Information

Type -
Description -
Location Contig128695: 7273-12391
Sequence    

Annotation

kegg
ID rcu:RCOM_1248100
description heat shock protein, putative (EC:1.3.1.74)
nr
ID XP_002527736.1
description heat shock protein, putative [Ricinus communis]
swissprot
ID P09189
description Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1
trembl
ID B9SP17
description Heat shock protein, putative OS=Ricinus communis GN=RCOM_1248100 PE=3 SV=1
Gene Ontology
ID GO:0005524
description heat shock cognate 70 kda protein 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08728: 7019-10216 , PASA_asmbl_08730: 9700-9800
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_128695_030 0.0 - - heat shock protein, putative [Ricinus communis]
2 Hb_000056_300 0.0646992901 - - PREDICTED: probable methyltransferase PMT2 isoform X2 [Jatropha curcas]
3 Hb_178127_010 0.0882903844 - - Ubiquitin ligase SINAT3, putative [Ricinus communis]
4 Hb_001565_020 0.089768533 - - PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial, partial [Jatropha curcas]
5 Hb_002942_110 0.094605394 transcription factor TF Family: ARF PREDICTED: auxin response factor 2-like [Jatropha curcas]
6 Hb_005054_310 0.0950706939 - - PREDICTED: glycosyltransferase family 64 protein C4 [Jatropha curcas]
7 Hb_000836_370 0.1030196517 - - PREDICTED: protein REVEILLE 3-like isoform X1 [Jatropha curcas]
8 Hb_005000_300 0.1101089638 transcription factor TF Family: TRAF putative regulatory protein NPR1 [Hevea brasiliensis]
9 Hb_001231_080 0.1117407138 - - PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 [Fragaria vesca subsp. vesca]
10 Hb_000869_030 0.1139078536 transcription factor TF Family: Pseudo ARR-B PREDICTED: two-component response regulator-like APRR5 isoform X1 [Jatropha curcas]
11 Hb_000227_310 0.1163210372 - - PREDICTED: cyclin-T1-4-like isoform X2 [Jatropha curcas]
12 Hb_004195_120 0.1165796562 desease resistance Gene Name: NB-ARC Disease resistance protein RGA2, putative [Ricinus communis]
13 Hb_003228_030 0.1170443766 - - PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Jatropha curcas]
14 Hb_001565_060 0.1239235779 - - PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial [Jatropha curcas]
15 Hb_001454_220 0.124080203 - - PREDICTED: ubiquitin-like-specific protease ESD4 [Jatropha curcas]
16 Hb_003895_020 0.1249648487 - - PREDICTED: dedicator of cytokinesis protein 7 isoform X2 [Jatropha curcas]
17 Hb_005649_090 0.1260123524 - - PREDICTED: ninja-family protein AFP3-like [Jatropha curcas]
18 Hb_096819_010 0.1261754792 - - PREDICTED: GRIP and coiled-coil domain-containing protein 2 isoform X4 [Jatropha curcas]
19 Hb_002073_280 0.126432129 - - PREDICTED: phospholipid-transporting ATPase 3 isoform X1 [Jatropha curcas]
20 Hb_018301_010 0.1264573221 - - PREDICTED: putative receptor-like protein kinase At4g00960 [Jatropha curcas]

Gene co-expression network

sample Hb_128695_030 Hb_128695_030 Hb_000056_300 Hb_000056_300 Hb_128695_030--Hb_000056_300 Hb_178127_010 Hb_178127_010 Hb_128695_030--Hb_178127_010 Hb_001565_020 Hb_001565_020 Hb_128695_030--Hb_001565_020 Hb_002942_110 Hb_002942_110 Hb_128695_030--Hb_002942_110 Hb_005054_310 Hb_005054_310 Hb_128695_030--Hb_005054_310 Hb_000836_370 Hb_000836_370 Hb_128695_030--Hb_000836_370 Hb_003078_030 Hb_003078_030 Hb_000056_300--Hb_003078_030 Hb_000056_300--Hb_005054_310 Hb_000056_300--Hb_000836_370 Hb_005649_090 Hb_005649_090 Hb_000056_300--Hb_005649_090 Hb_005000_300 Hb_005000_300 Hb_000056_300--Hb_005000_300 Hb_178127_010--Hb_001565_020 Hb_178127_010--Hb_005000_300 Hb_000120_420 Hb_000120_420 Hb_178127_010--Hb_000120_420 Hb_018301_010 Hb_018301_010 Hb_178127_010--Hb_018301_010 Hb_011909_060 Hb_011909_060 Hb_178127_010--Hb_011909_060 Hb_001454_220 Hb_001454_220 Hb_001565_020--Hb_001454_220 Hb_000422_110 Hb_000422_110 Hb_001565_020--Hb_000422_110 Hb_001565_060 Hb_001565_060 Hb_001565_020--Hb_001565_060 Hb_153161_010 Hb_153161_010 Hb_001565_020--Hb_153161_010 Hb_004195_120 Hb_004195_120 Hb_002942_110--Hb_004195_120 Hb_020178_050 Hb_020178_050 Hb_002942_110--Hb_020178_050 Hb_001369_770 Hb_001369_770 Hb_002942_110--Hb_001369_770 Hb_004324_060 Hb_004324_060 Hb_002942_110--Hb_004324_060 Hb_003895_020 Hb_003895_020 Hb_002942_110--Hb_003895_020 Hb_005054_310--Hb_000836_370 Hb_003228_030 Hb_003228_030 Hb_005054_310--Hb_003228_030 Hb_000227_310 Hb_000227_310 Hb_005054_310--Hb_000227_310 Hb_001484_100 Hb_001484_100 Hb_005054_310--Hb_001484_100 Hb_000836_370--Hb_005000_300 Hb_001231_080 Hb_001231_080 Hb_000836_370--Hb_001231_080 Hb_000836_370--Hb_003078_030 Hb_000836_370--Hb_001484_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
431.096 1270.41 616.324 357.271 465.123 366.366
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
79.7931 56.039 190.673 227.031 211.959

CAGE analysis