Hb_000422_110

Information

Type -
Description -
Location Contig422: 156836-157567
Sequence    

Annotation

kegg
ID rcu:RCOM_1282670
description hypothetical protein
nr
ID XP_012081539.1
description PREDICTED: uncharacterized protein At1g08160-like [Jatropha curcas]
swissprot
ID Q9SJ52
description Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1
trembl
ID A0A067K175
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19149 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 027_F02.ab1: 157060-157704

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000422_110 0.0 - - PREDICTED: uncharacterized protein At1g08160-like [Jatropha curcas]
2 Hb_013749_020 0.0692558429 - - PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1 [Jatropha curcas]
3 Hb_007813_030 0.0875988904 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At4g19050 [Jatropha curcas]
4 Hb_002073_280 0.0940707838 - - PREDICTED: phospholipid-transporting ATPase 3 isoform X1 [Jatropha curcas]
5 Hb_030827_060 0.0949014578 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-2b [Jatropha curcas]
6 Hb_000574_510 0.0972839405 - - protein kinase, putative [Ricinus communis]
7 Hb_000544_060 0.0983092751 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]
8 Hb_167381_020 0.0991234111 - - PREDICTED: uncharacterized protein LOC105650634 [Jatropha curcas]
9 Hb_001221_160 0.1010103929 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
10 Hb_001454_220 0.1013447073 - - PREDICTED: ubiquitin-like-specific protease ESD4 [Jatropha curcas]
11 Hb_000062_470 0.1021877151 - - PREDICTED: cyclin-dependent kinase G-2 [Jatropha curcas]
12 Hb_001307_010 0.1029404878 - - PREDICTED: uncharacterized protein LOC103939917 [Pyrus x bretschneideri]
13 Hb_003858_090 0.1054709962 - - Filamin-A-interacting protein, putative [Ricinus communis]
14 Hb_000197_290 0.1085403222 - - PREDICTED: A-agglutinin anchorage subunit [Jatropha curcas]
15 Hb_001141_370 0.1099554015 - - PREDICTED: uncharacterized protein LOC105631986 [Jatropha curcas]
16 Hb_026198_040 0.1100086101 - - PREDICTED: uncharacterized protein LOC105628901 [Jatropha curcas]
17 Hb_000661_200 0.111092473 - - PREDICTED: uncharacterized protein LOC105648311 isoform X1 [Jatropha curcas]
18 Hb_118840_050 0.113362307 - - hypothetical protein CISIN_1g0019781mg, partial [Citrus sinensis]
19 Hb_178127_010 0.1137443828 - - Ubiquitin ligase SINAT3, putative [Ricinus communis]
20 Hb_000483_380 0.1140938277 - - PREDICTED: bax inhibitor 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000422_110 Hb_000422_110 Hb_013749_020 Hb_013749_020 Hb_000422_110--Hb_013749_020 Hb_007813_030 Hb_007813_030 Hb_000422_110--Hb_007813_030 Hb_002073_280 Hb_002073_280 Hb_000422_110--Hb_002073_280 Hb_030827_060 Hb_030827_060 Hb_000422_110--Hb_030827_060 Hb_000574_510 Hb_000574_510 Hb_000422_110--Hb_000574_510 Hb_000544_060 Hb_000544_060 Hb_000422_110--Hb_000544_060 Hb_013749_020--Hb_002073_280 Hb_013749_020--Hb_000544_060 Hb_118840_050 Hb_118840_050 Hb_013749_020--Hb_118840_050 Hb_008406_040 Hb_008406_040 Hb_013749_020--Hb_008406_040 Hb_000661_200 Hb_000661_200 Hb_013749_020--Hb_000661_200 Hb_007813_030--Hb_000661_200 Hb_000062_470 Hb_000062_470 Hb_007813_030--Hb_000062_470 Hb_000197_290 Hb_000197_290 Hb_007813_030--Hb_000197_290 Hb_007813_030--Hb_000574_510 Hb_052764_060 Hb_052764_060 Hb_007813_030--Hb_052764_060 Hb_005104_010 Hb_005104_010 Hb_007813_030--Hb_005104_010 Hb_002282_060 Hb_002282_060 Hb_002073_280--Hb_002282_060 Hb_007576_220 Hb_007576_220 Hb_002073_280--Hb_007576_220 Hb_155159_010 Hb_155159_010 Hb_002073_280--Hb_155159_010 Hb_000526_060 Hb_000526_060 Hb_002073_280--Hb_000526_060 Hb_000896_060 Hb_000896_060 Hb_002073_280--Hb_000896_060 Hb_026198_040 Hb_026198_040 Hb_030827_060--Hb_026198_040 Hb_104265_030 Hb_104265_030 Hb_030827_060--Hb_104265_030 Hb_018133_030 Hb_018133_030 Hb_030827_060--Hb_018133_030 Hb_004449_050 Hb_004449_050 Hb_030827_060--Hb_004449_050 Hb_002999_060 Hb_002999_060 Hb_030827_060--Hb_002999_060 Hb_000574_510--Hb_000544_060 Hb_003604_040 Hb_003604_040 Hb_000574_510--Hb_003604_040 Hb_000574_510--Hb_000661_200 Hb_000574_510--Hb_000197_290 Hb_011671_230 Hb_011671_230 Hb_000574_510--Hb_011671_230 Hb_001141_370 Hb_001141_370 Hb_000544_060--Hb_001141_370 Hb_000544_060--Hb_000661_200 Hb_000544_060--Hb_052764_060 Hb_006663_040 Hb_006663_040 Hb_000544_060--Hb_006663_040 Hb_001902_060 Hb_001902_060 Hb_000544_060--Hb_001902_060 Hb_000832_320 Hb_000832_320 Hb_000544_060--Hb_000832_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
25.4424 61.672 21.4268 21.2074 50.3214 29.1772
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.92194 7.77429 9.97263 15.0332 15.9336

CAGE analysis