Hb_030827_060

Information

Type transcription factor
Description TF Family: HSF
Location Contig30827: 33893-35242
Sequence    

Annotation

kegg
ID rcu:RCOM_1496640
description Heat shock factor protein, putative
nr
ID XP_012090286.1
description PREDICTED: heat stress transcription factor B-2b [Jatropha curcas]
swissprot
ID Q9SCW4
description Heat stress transcription factor B-2a OS=Arabidopsis thaliana GN=HSFB2A PE=2 SV=1
trembl
ID A0A067JEK5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26137 PE=3 SV=1
Gene Ontology
ID GO:0005634
description heat stress transcription factor b-2a

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32551: 33564-35084
cDNA
(Sanger)
(ID:Location)		 020_N23.ab1: 34211-35090

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_030827_060 0.0 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-2b [Jatropha curcas]
2 Hb_000422_110 0.0949014578 - - PREDICTED: uncharacterized protein At1g08160-like [Jatropha curcas]
3 Hb_026198_040 0.0991729488 - - PREDICTED: uncharacterized protein LOC105628901 [Jatropha curcas]
4 Hb_104265_030 0.116585544 - - hypothetical protein POPTR_0001s31230g [Populus trichocarpa]
5 Hb_018133_030 0.1183019444 - - Heme-binding protein, putative [Ricinus communis]
6 Hb_004449_050 0.1201419844 - - PREDICTED: tyrosine-sulfated glycopeptide receptor 1-like [Jatropha curcas]
7 Hb_002999_060 0.1215076549 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 [Jatropha curcas]
8 Hb_000544_060 0.1221417674 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]
9 Hb_029223_050 0.1235173508 - - PREDICTED: uncharacterized protein LOC105642267 isoform X1 [Jatropha curcas]
10 Hb_003858_090 0.1246885619 - - Filamin-A-interacting protein, putative [Ricinus communis]
11 Hb_001221_160 0.1253442948 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
12 Hb_000483_380 0.1255056723 - - PREDICTED: bax inhibitor 1-like [Jatropha curcas]
13 Hb_001189_130 0.1267007591 transcription factor TF Family: NAC PREDICTED: protein ATAF2-like [Jatropha curcas]
14 Hb_015475_020 0.1275684836 - - importin beta-1, putative [Ricinus communis]
15 Hb_013394_060 0.1277211521 - - PREDICTED: IST1-like protein isoform X1 [Jatropha curcas]
16 Hb_013749_020 0.1287482021 - - PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1 [Jatropha curcas]
17 Hb_006745_010 0.1288998347 - - PREDICTED: uncharacterized protein LOC105640095 [Jatropha curcas]
18 Hb_000340_110 0.1293324717 - - PREDICTED: mediator of RNA polymerase II transcription subunit 33B isoform X1 [Jatropha curcas]
19 Hb_001141_370 0.1308418143 - - PREDICTED: uncharacterized protein LOC105631986 [Jatropha curcas]
20 Hb_001902_060 0.134692693 - - PREDICTED: U-box domain-containing protein 32 isoform X3 [Jatropha curcas]

Gene co-expression network

sample Hb_030827_060 Hb_030827_060 Hb_000422_110 Hb_000422_110 Hb_030827_060--Hb_000422_110 Hb_026198_040 Hb_026198_040 Hb_030827_060--Hb_026198_040 Hb_104265_030 Hb_104265_030 Hb_030827_060--Hb_104265_030 Hb_018133_030 Hb_018133_030 Hb_030827_060--Hb_018133_030 Hb_004449_050 Hb_004449_050 Hb_030827_060--Hb_004449_050 Hb_002999_060 Hb_002999_060 Hb_030827_060--Hb_002999_060 Hb_013749_020 Hb_013749_020 Hb_000422_110--Hb_013749_020 Hb_007813_030 Hb_007813_030 Hb_000422_110--Hb_007813_030 Hb_002073_280 Hb_002073_280 Hb_000422_110--Hb_002073_280 Hb_000574_510 Hb_000574_510 Hb_000422_110--Hb_000574_510 Hb_000544_060 Hb_000544_060 Hb_000422_110--Hb_000544_060 Hb_029223_050 Hb_029223_050 Hb_026198_040--Hb_029223_050 Hb_000340_110 Hb_000340_110 Hb_026198_040--Hb_000340_110 Hb_001141_370 Hb_001141_370 Hb_026198_040--Hb_001141_370 Hb_026198_040--Hb_000544_060 Hb_000832_320 Hb_000832_320 Hb_026198_040--Hb_000832_320 Hb_104265_030--Hb_029223_050 Hb_003125_030 Hb_003125_030 Hb_104265_030--Hb_003125_030 Hb_000123_350 Hb_000123_350 Hb_104265_030--Hb_000123_350 Hb_012226_010 Hb_012226_010 Hb_104265_030--Hb_012226_010 Hb_104265_030--Hb_026198_040 Hb_000896_060 Hb_000896_060 Hb_104265_030--Hb_000896_060 Hb_009028_030 Hb_009028_030 Hb_018133_030--Hb_009028_030 Hb_057451_010 Hb_057451_010 Hb_018133_030--Hb_057451_010 Hb_000808_070 Hb_000808_070 Hb_018133_030--Hb_000808_070 Hb_018133_030--Hb_004449_050 Hb_164010_070 Hb_164010_070 Hb_018133_030--Hb_164010_070 Hb_003517_060 Hb_003517_060 Hb_004449_050--Hb_003517_060 Hb_003349_010 Hb_003349_010 Hb_004449_050--Hb_003349_010 Hb_004449_050--Hb_000340_110 Hb_004449_050--Hb_026198_040 Hb_013394_060 Hb_013394_060 Hb_002999_060--Hb_013394_060 Hb_002965_030 Hb_002965_030 Hb_002999_060--Hb_002965_030 Hb_000720_070 Hb_000720_070 Hb_002999_060--Hb_000720_070 Hb_000483_380 Hb_000483_380 Hb_002999_060--Hb_000483_380 Hb_002999_060--Hb_000422_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
46.016 111.095 19.0763 34.9312 88.8038 37.8087
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.4737 15.5329 23.8428 17.8002 19.6447

CAGE analysis