Hb_000483_380

Information

Type -
Description -
Location Contig483: 335664-338185
Sequence    

Annotation

kegg
ID sly:543906
description BI-1; Bax inhibitor
nr
ID XP_012070085.1
description PREDICTED: bax inhibitor 1-like [Jatropha curcas]
swissprot
ID Q9LD45
description Bax inhibitor 1 OS=Arabidopsis thaliana GN=BI-1 PE=1 SV=1
trembl
ID A0A067KUW2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03473 PE=4 SV=1
Gene Ontology
ID GO:0016021
description bax inhibitor 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44837: 335617-338194
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000483_380 0.0 - - PREDICTED: bax inhibitor 1-like [Jatropha curcas]
2 Hb_003040_020 0.0886102431 - - PREDICTED: protein cereblon [Jatropha curcas]
3 Hb_158604_010 0.0892196924 - - PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3 [Jatropha curcas]
4 Hb_033312_150 0.0915260735 - - calmodulin-binding heat-shock protein, putative [Ricinus communis]
5 Hb_013749_020 0.099000021 - - PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1 [Jatropha curcas]
6 Hb_000116_060 0.1005492748 - - plant ubiquilin, putative [Ricinus communis]
7 Hb_000544_060 0.1012036078 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]
8 Hb_013394_060 0.1043340159 - - PREDICTED: IST1-like protein isoform X1 [Jatropha curcas]
9 Hb_001902_060 0.105415433 - - PREDICTED: U-box domain-containing protein 32 isoform X3 [Jatropha curcas]
10 Hb_001221_160 0.1085468814 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
11 Hb_002379_050 0.1089307473 - - PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 [Jatropha curcas]
12 Hb_000062_470 0.1091733725 - - PREDICTED: cyclin-dependent kinase G-2 [Jatropha curcas]
13 Hb_000331_330 0.110708142 - - PREDICTED: transcription factor GTE10 isoform X1 [Jatropha curcas]
14 Hb_000661_200 0.1107857823 - - PREDICTED: uncharacterized protein LOC105648311 isoform X1 [Jatropha curcas]
15 Hb_001141_370 0.1128467685 - - PREDICTED: uncharacterized protein LOC105631986 [Jatropha curcas]
16 Hb_143243_010 0.113115954 - - PREDICTED: uncharacterized protein LOC105644190 [Jatropha curcas]
17 Hb_001243_060 0.1131182333 - - PREDICTED: probable magnesium transporter NIPA6 [Jatropha curcas]
18 Hb_000152_340 0.1136568423 - - PREDICTED: probable rRNA-processing protein EBP2 homolog [Jatropha curcas]
19 Hb_000191_130 0.1137169375 - - PREDICTED: RNA polymerase-associated protein CTR9 homolog [Jatropha curcas]
20 Hb_000787_090 0.1138103888 - - PREDICTED: DDRGK domain-containing protein 1 [Vitis vinifera]

Gene co-expression network

sample Hb_000483_380 Hb_000483_380 Hb_003040_020 Hb_003040_020 Hb_000483_380--Hb_003040_020 Hb_158604_010 Hb_158604_010 Hb_000483_380--Hb_158604_010 Hb_033312_150 Hb_033312_150 Hb_000483_380--Hb_033312_150 Hb_013749_020 Hb_013749_020 Hb_000483_380--Hb_013749_020 Hb_000116_060 Hb_000116_060 Hb_000483_380--Hb_000116_060 Hb_000544_060 Hb_000544_060 Hb_000483_380--Hb_000544_060 Hb_004429_160 Hb_004429_160 Hb_003040_020--Hb_004429_160 Hb_000032_010 Hb_000032_010 Hb_003040_020--Hb_000032_010 Hb_005539_190 Hb_005539_190 Hb_003040_020--Hb_005539_190 Hb_000191_130 Hb_000191_130 Hb_003040_020--Hb_000191_130 Hb_019153_020 Hb_019153_020 Hb_003040_020--Hb_019153_020 Hb_000856_140 Hb_000856_140 Hb_003040_020--Hb_000856_140 Hb_032920_130 Hb_032920_130 Hb_158604_010--Hb_032920_130 Hb_105641_010 Hb_105641_010 Hb_158604_010--Hb_105641_010 Hb_000115_160 Hb_000115_160 Hb_158604_010--Hb_000115_160 Hb_008112_030 Hb_008112_030 Hb_158604_010--Hb_008112_030 Hb_007380_140 Hb_007380_140 Hb_158604_010--Hb_007380_140 Hb_097218_010 Hb_097218_010 Hb_033312_150--Hb_097218_010 Hb_003666_020 Hb_003666_020 Hb_033312_150--Hb_003666_020 Hb_000352_070 Hb_000352_070 Hb_033312_150--Hb_000352_070 Hb_033312_150--Hb_158604_010 Hb_000343_110 Hb_000343_110 Hb_033312_150--Hb_000343_110 Hb_000422_110 Hb_000422_110 Hb_013749_020--Hb_000422_110 Hb_002073_280 Hb_002073_280 Hb_013749_020--Hb_002073_280 Hb_013749_020--Hb_000544_060 Hb_118840_050 Hb_118840_050 Hb_013749_020--Hb_118840_050 Hb_008406_040 Hb_008406_040 Hb_013749_020--Hb_008406_040 Hb_000661_200 Hb_000661_200 Hb_013749_020--Hb_000661_200 Hb_001243_060 Hb_001243_060 Hb_000116_060--Hb_001243_060 Hb_003680_230 Hb_003680_230 Hb_000116_060--Hb_003680_230 Hb_000162_280 Hb_000162_280 Hb_000116_060--Hb_000162_280 Hb_001377_070 Hb_001377_070 Hb_000116_060--Hb_001377_070 Hb_009112_010 Hb_009112_010 Hb_000116_060--Hb_009112_010 Hb_000116_060--Hb_003040_020 Hb_001141_370 Hb_001141_370 Hb_000544_060--Hb_001141_370 Hb_000544_060--Hb_000661_200 Hb_052764_060 Hb_052764_060 Hb_000544_060--Hb_052764_060 Hb_006663_040 Hb_006663_040 Hb_000544_060--Hb_006663_040 Hb_001902_060 Hb_001902_060 Hb_000544_060--Hb_001902_060 Hb_000832_320 Hb_000832_320 Hb_000544_060--Hb_000832_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
325.401 628.152 282.84 328.227 771.162 334.453
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
185.163 153.452 249.59 265.791 164.835

CAGE analysis