Hb_000343_110

Information

Type -
Description -
Location Contig343: 80136-85994
Sequence    

Annotation

kegg
ID rcu:RCOM_0980870
description Heat shock 70 kDa protein, putative (EC:1.3.1.74)
nr
ID XP_002528199.1
description Heat shock 70 kDa protein, putative [Ricinus communis]
swissprot
ID Q9S7C0
description Heat shock 70 kDa protein 14 OS=Arabidopsis thaliana GN=HSP70-14 PE=2 SV=1
trembl
ID B9SQC9
description Heat shock 70 kDa protein, putative OS=Ricinus communis GN=RCOM_0980870 PE=3 SV=1
Gene Ontology
ID GO:0005524
description heat shock 70 kda protein 15-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35834: 80268-85984 , PASA_asmbl_35836: 80399-80557
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000343_110 0.0 - - Heat shock 70 kDa protein, putative [Ricinus communis]
2 Hb_011344_020 0.0822551016 - - PREDICTED: hsp70-Hsp90 organizing protein 3-like [Jatropha curcas]
3 Hb_000573_060 0.0885773493 - - PREDICTED: eukaryotic translation initiation factor 2D isoform X1 [Jatropha curcas]
4 Hb_002044_170 0.0898968213 - - hypothetical protein POPTR_0014s17160g [Populus trichocarpa]
5 Hb_128743_010 0.0901915586 - - RNA-binding protein, putative [Ricinus communis]
6 Hb_158604_010 0.0932528975 - - PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3 [Jatropha curcas]
7 Hb_032920_130 0.0934071286 - - PREDICTED: vacuolar-sorting receptor 3 [Jatropha curcas]
8 Hb_010417_060 0.0958016655 - - PREDICTED: protein SGT1 homolog A-like [Jatropha curcas]
9 Hb_089140_050 0.0959227431 - - hypothetical protein JCGZ_07485 [Jatropha curcas]
10 Hb_001440_040 0.0984798344 - - hypothetical protein POPTR_0008s03520g [Populus trichocarpa]
11 Hb_001235_230 0.1006036626 - - PREDICTED: protein transport protein SEC16B homolog [Jatropha curcas]
12 Hb_001301_130 0.1010409617 - - PREDICTED: uncharacterized protein LOC105632935 [Jatropha curcas]
13 Hb_000661_200 0.1015863117 - - PREDICTED: uncharacterized protein LOC105648311 isoform X1 [Jatropha curcas]
14 Hb_009486_080 0.1021215791 - - PREDICTED: uncharacterized protein LOC105643242 [Jatropha curcas]
15 Hb_001959_020 0.1031952239 - - PREDICTED: uncharacterized protein LOC105638454 isoform X1 [Jatropha curcas]
16 Hb_000086_150 0.1058215903 transcription factor TF Family: Jumonji PREDICTED: putative lysine-specific demethylase JMJ16 isoform X1 [Jatropha curcas]
17 Hb_001277_300 0.1087534781 - - PREDICTED: uncharacterized protein LOC105632051 isoform X4 [Jatropha curcas]
18 Hb_002641_130 0.1087926009 - - PREDICTED: uncharacterized protein LOC105643556 [Jatropha curcas]
19 Hb_000260_560 0.1088716695 - - PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Jatropha curcas]
20 Hb_004108_100 0.1106606302 - - PREDICTED: mediator of RNA polymerase II transcription subunit 33B isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000343_110 Hb_000343_110 Hb_011344_020 Hb_011344_020 Hb_000343_110--Hb_011344_020 Hb_000573_060 Hb_000573_060 Hb_000343_110--Hb_000573_060 Hb_002044_170 Hb_002044_170 Hb_000343_110--Hb_002044_170 Hb_128743_010 Hb_128743_010 Hb_000343_110--Hb_128743_010 Hb_158604_010 Hb_158604_010 Hb_000343_110--Hb_158604_010 Hb_032920_130 Hb_032920_130 Hb_000343_110--Hb_032920_130 Hb_089140_050 Hb_089140_050 Hb_011344_020--Hb_089140_050 Hb_000958_070 Hb_000958_070 Hb_011344_020--Hb_000958_070 Hb_003884_030 Hb_003884_030 Hb_011344_020--Hb_003884_030 Hb_000376_060 Hb_000376_060 Hb_011344_020--Hb_000376_060 Hb_000429_220 Hb_000429_220 Hb_011344_020--Hb_000429_220 Hb_002641_130 Hb_002641_130 Hb_000573_060--Hb_002641_130 Hb_001244_150 Hb_001244_150 Hb_000573_060--Hb_001244_150 Hb_000086_150 Hb_000086_150 Hb_000573_060--Hb_000086_150 Hb_000260_560 Hb_000260_560 Hb_000573_060--Hb_000260_560 Hb_009486_080 Hb_009486_080 Hb_000573_060--Hb_009486_080 Hb_001001_150 Hb_001001_150 Hb_000573_060--Hb_001001_150 Hb_001235_230 Hb_001235_230 Hb_002044_170--Hb_001235_230 Hb_030627_060 Hb_030627_060 Hb_002044_170--Hb_030627_060 Hb_002044_170--Hb_032920_130 Hb_000261_030 Hb_000261_030 Hb_002044_170--Hb_000261_030 Hb_000176_130 Hb_000176_130 Hb_002044_170--Hb_000176_130 Hb_000035_410 Hb_000035_410 Hb_002044_170--Hb_000035_410 Hb_004108_100 Hb_004108_100 Hb_128743_010--Hb_004108_100 Hb_000025_320 Hb_000025_320 Hb_128743_010--Hb_000025_320 Hb_144831_010 Hb_144831_010 Hb_128743_010--Hb_144831_010 Hb_000960_100 Hb_000960_100 Hb_128743_010--Hb_000960_100 Hb_000661_200 Hb_000661_200 Hb_128743_010--Hb_000661_200 Hb_001959_020 Hb_001959_020 Hb_128743_010--Hb_001959_020 Hb_158604_010--Hb_032920_130 Hb_105641_010 Hb_105641_010 Hb_158604_010--Hb_105641_010 Hb_000115_160 Hb_000115_160 Hb_158604_010--Hb_000115_160 Hb_000483_380 Hb_000483_380 Hb_158604_010--Hb_000483_380 Hb_008112_030 Hb_008112_030 Hb_158604_010--Hb_008112_030 Hb_007380_140 Hb_007380_140 Hb_158604_010--Hb_007380_140 Hb_010417_060 Hb_010417_060 Hb_032920_130--Hb_010417_060 Hb_032920_130--Hb_000261_030 Hb_032920_130--Hb_000035_410 Hb_006787_060 Hb_006787_060 Hb_032920_130--Hb_006787_060 Hb_032920_130--Hb_001235_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
55.7812 120.375 64.4825 62.6943 176.548 85.2713
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
46.9241 23.6604 58.2783 64.526 94.5924

CAGE analysis