Hb_011344_020

Information

Type -
Description -
Location Contig11344: 7613-12569
Sequence    

Annotation

kegg
ID rcu:RCOM_1679700
description heat shock protein 70 (HSP70)-interacting protein, putative
nr
ID XP_012087126.1
description PREDICTED: hsp70-Hsp90 organizing protein 3-like [Jatropha curcas]
swissprot
ID Q9STH1
description Hsp70-Hsp90 organizing protein 3 OS=Arabidopsis thaliana GN=HOP3 PE=2 SV=1
trembl
ID A0A067JNR3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20777 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03991: 7690-11637 , PASA_asmbl_03992: 10995-11215
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011344_020 0.0 - - PREDICTED: hsp70-Hsp90 organizing protein 3-like [Jatropha curcas]
2 Hb_089140_050 0.0642279676 - - hypothetical protein JCGZ_07485 [Jatropha curcas]
3 Hb_000958_070 0.0786881126 - - hypothetical protein PRUPE_ppa007681mg [Prunus persica]
4 Hb_000343_110 0.0822551016 - - Heat shock 70 kDa protein, putative [Ricinus communis]
5 Hb_003884_030 0.0844203306 - - GTP-binding protein alpha subunit, gna, putative [Ricinus communis]
6 Hb_000376_060 0.090772165 - - PREDICTED: probable E3 ubiquitin ligase SUD1 isoform X2 [Jatropha curcas]
7 Hb_000429_220 0.0945827685 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105640858 isoform X1 [Jatropha curcas]
8 Hb_000853_210 0.0946912132 - - PREDICTED: uncharacterized protein LOC105642575 isoform X1 [Jatropha curcas]
9 Hb_000260_560 0.0953740395 - - PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Jatropha curcas]
10 Hb_002044_170 0.0960950321 - - hypothetical protein POPTR_0014s17160g [Populus trichocarpa]
11 Hb_000086_440 0.0979923009 - - PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Jatropha curcas]
12 Hb_000215_220 0.0989498094 - - PREDICTED: derlin-1 isoform X1 [Jatropha curcas]
13 Hb_001235_230 0.100323138 - - PREDICTED: protein transport protein SEC16B homolog [Jatropha curcas]
14 Hb_000671_070 0.1008823989 - - PREDICTED: uncharacterized protein LOC105630621 [Jatropha curcas]
15 Hb_004453_110 0.1011141844 - - Peptidyl-prolyl cis-trans isomerase CYP19-2 isoform 1 [Theobroma cacao]
16 Hb_000035_410 0.1022568271 - - PREDICTED: eukaryotic translation initiation factor 3 subunit B-like [Jatropha curcas]
17 Hb_004920_090 0.1023996157 - - PREDICTED: probable glutamyl endopeptidase, chloroplastic isoform X1 [Jatropha curcas]
18 Hb_032920_130 0.1036722377 - - PREDICTED: vacuolar-sorting receptor 3 [Jatropha curcas]
19 Hb_000086_150 0.1038198908 transcription factor TF Family: Jumonji PREDICTED: putative lysine-specific demethylase JMJ16 isoform X1 [Jatropha curcas]
20 Hb_004701_050 0.1040066199 - - alpha1 family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_011344_020 Hb_011344_020 Hb_089140_050 Hb_089140_050 Hb_011344_020--Hb_089140_050 Hb_000958_070 Hb_000958_070 Hb_011344_020--Hb_000958_070 Hb_000343_110 Hb_000343_110 Hb_011344_020--Hb_000343_110 Hb_003884_030 Hb_003884_030 Hb_011344_020--Hb_003884_030 Hb_000376_060 Hb_000376_060 Hb_011344_020--Hb_000376_060 Hb_000429_220 Hb_000429_220 Hb_011344_020--Hb_000429_220 Hb_004453_110 Hb_004453_110 Hb_089140_050--Hb_004453_110 Hb_000671_070 Hb_000671_070 Hb_089140_050--Hb_000671_070 Hb_089140_050--Hb_000429_220 Hb_000261_030 Hb_000261_030 Hb_089140_050--Hb_000261_030 Hb_000035_410 Hb_000035_410 Hb_089140_050--Hb_000035_410 Hb_000260_560 Hb_000260_560 Hb_000958_070--Hb_000260_560 Hb_004631_150 Hb_004631_150 Hb_000958_070--Hb_004631_150 Hb_002233_130 Hb_002233_130 Hb_000958_070--Hb_002233_130 Hb_162275_040 Hb_162275_040 Hb_000958_070--Hb_162275_040 Hb_006355_020 Hb_006355_020 Hb_000958_070--Hb_006355_020 Hb_000573_060 Hb_000573_060 Hb_000343_110--Hb_000573_060 Hb_002044_170 Hb_002044_170 Hb_000343_110--Hb_002044_170 Hb_128743_010 Hb_128743_010 Hb_000343_110--Hb_128743_010 Hb_158604_010 Hb_158604_010 Hb_000343_110--Hb_158604_010 Hb_032920_130 Hb_032920_130 Hb_000343_110--Hb_032920_130 Hb_027380_140 Hb_027380_140 Hb_003884_030--Hb_027380_140 Hb_003884_030--Hb_000035_410 Hb_003884_030--Hb_089140_050 Hb_004108_100 Hb_004108_100 Hb_003884_030--Hb_004108_100 Hb_003656_180 Hb_003656_180 Hb_003884_030--Hb_003656_180 Hb_003884_030--Hb_000429_220 Hb_000086_150 Hb_000086_150 Hb_000376_060--Hb_000086_150 Hb_007305_020 Hb_007305_020 Hb_000376_060--Hb_007305_020 Hb_004701_050 Hb_004701_050 Hb_000376_060--Hb_004701_050 Hb_041327_020 Hb_041327_020 Hb_000376_060--Hb_041327_020 Hb_098209_010 Hb_098209_010 Hb_000376_060--Hb_098209_010 Hb_000429_220--Hb_004453_110 Hb_009175_020 Hb_009175_020 Hb_000429_220--Hb_009175_020 Hb_009503_030 Hb_009503_030 Hb_000429_220--Hb_009503_030 Hb_000429_220--Hb_027380_140 Hb_002823_030 Hb_002823_030 Hb_000429_220--Hb_002823_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
85.6042 105.383 66.0707 78.3253 166.75 101.563
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
55.1408 29.6936 56.5422 58.05 139.812

CAGE analysis