Hb_033312_150

Information

Type -
Description -
Location Contig33312: 129701-134889
Sequence    

Annotation

kegg
ID rcu:RCOM_0371830
description calmodulin-binding heat-shock protein, putative
nr
ID XP_002531920.1
description calmodulin-binding heat-shock protein, putative [Ricinus communis]
swissprot
ID Q9Y4D2
description Sn1-specific diacylglycerol lipase alpha OS=Homo sapiens GN=DAGLA PE=1 SV=3
trembl
ID B9T101
description Calmodulin-binding heat-shock protein, putative OS=Ricinus communis GN=RCOM_0371830 PE=4 SV=1
Gene Ontology
ID GO:0005886
description calmodulin-binding heat-shock

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34977: 129962-131958 , PASA_asmbl_34978: 131969-134202 , PASA_asmbl_34979: 134444-134586
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033312_150 0.0 - - calmodulin-binding heat-shock protein, putative [Ricinus communis]
2 Hb_097218_010 0.080371147 - - PREDICTED: uncharacterized protein LOC105632664 isoform X1 [Jatropha curcas]
3 Hb_000483_380 0.0915260735 - - PREDICTED: bax inhibitor 1-like [Jatropha curcas]
4 Hb_003666_020 0.1072278882 - - kinase, putative [Ricinus communis]
5 Hb_000352_070 0.1099507635 - - Potassium transporter, putative [Ricinus communis]
6 Hb_158604_010 0.1123958938 - - PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3 [Jatropha curcas]
7 Hb_000343_110 0.1132201255 - - Heat shock 70 kDa protein, putative [Ricinus communis]
8 Hb_001668_010 0.1135597979 - - PREDICTED: RNA-binding protein with multiple splicing [Jatropha curcas]
9 Hb_001959_020 0.1155827868 - - PREDICTED: uncharacterized protein LOC105638454 isoform X1 [Jatropha curcas]
10 Hb_000635_030 0.1169340089 - - mannosyl-oligosaccharide glucosidase, putative [Ricinus communis]
11 Hb_128743_010 0.1194730386 - - RNA-binding protein, putative [Ricinus communis]
12 Hb_010712_090 0.1198028303 - - PREDICTED: uncharacterized protein LOC105631276 [Jatropha curcas]
13 Hb_134362_010 0.1223459919 - - PREDICTED: FAS-associated factor 2 [Jatropha curcas]
14 Hb_000190_190 0.1235313141 - - PREDICTED: BI1-like protein [Gossypium raimondii]
15 Hb_007558_070 0.1236801209 - - PREDICTED: pre-mRNA-processing factor 39 isoform X2 [Jatropha curcas]
16 Hb_021297_050 0.1236973184 - - PREDICTED: signal recognition particle receptor subunit alpha [Jatropha curcas]
17 Hb_000982_050 0.1237231493 - - PREDICTED: uncharacterized protein LOC105643124 isoform X1 [Jatropha curcas]
18 Hb_001454_170 0.1238984017 - - PREDICTED: uncharacterized protein LOC105643431 [Jatropha curcas]
19 Hb_154114_010 0.1247223294 - - PREDICTED: SWI/SNF complex subunit SWI3A isoform X2 [Jatropha curcas]
20 Hb_178051_070 0.1248251205 - - PREDICTED: exocyst complex component EXO70B1-like [Jatropha curcas]

Gene co-expression network

sample Hb_033312_150 Hb_033312_150 Hb_097218_010 Hb_097218_010 Hb_033312_150--Hb_097218_010 Hb_000483_380 Hb_000483_380 Hb_033312_150--Hb_000483_380 Hb_003666_020 Hb_003666_020 Hb_033312_150--Hb_003666_020 Hb_000352_070 Hb_000352_070 Hb_033312_150--Hb_000352_070 Hb_158604_010 Hb_158604_010 Hb_033312_150--Hb_158604_010 Hb_000343_110 Hb_000343_110 Hb_033312_150--Hb_000343_110 Hb_001959_020 Hb_001959_020 Hb_097218_010--Hb_001959_020 Hb_001668_010 Hb_001668_010 Hb_097218_010--Hb_001668_010 Hb_007558_070 Hb_007558_070 Hb_097218_010--Hb_007558_070 Hb_023226_080 Hb_023226_080 Hb_097218_010--Hb_023226_080 Hb_128743_010 Hb_128743_010 Hb_097218_010--Hb_128743_010 Hb_003040_020 Hb_003040_020 Hb_000483_380--Hb_003040_020 Hb_000483_380--Hb_158604_010 Hb_013749_020 Hb_013749_020 Hb_000483_380--Hb_013749_020 Hb_000116_060 Hb_000116_060 Hb_000483_380--Hb_000116_060 Hb_000544_060 Hb_000544_060 Hb_000483_380--Hb_000544_060 Hb_004553_030 Hb_004553_030 Hb_003666_020--Hb_004553_030 Hb_000928_220 Hb_000928_220 Hb_003666_020--Hb_000928_220 Hb_000402_080 Hb_000402_080 Hb_003666_020--Hb_000402_080 Hb_001258_020 Hb_001258_020 Hb_003666_020--Hb_001258_020 Hb_008103_060 Hb_008103_060 Hb_003666_020--Hb_008103_060 Hb_001205_200 Hb_001205_200 Hb_003666_020--Hb_001205_200 Hb_002027_280 Hb_002027_280 Hb_000352_070--Hb_002027_280 Hb_134362_010 Hb_134362_010 Hb_000352_070--Hb_134362_010 Hb_000949_020 Hb_000949_020 Hb_000352_070--Hb_000949_020 Hb_004429_010 Hb_004429_010 Hb_000352_070--Hb_004429_010 Hb_002284_170 Hb_002284_170 Hb_000352_070--Hb_002284_170 Hb_004785_030 Hb_004785_030 Hb_000352_070--Hb_004785_030 Hb_032920_130 Hb_032920_130 Hb_158604_010--Hb_032920_130 Hb_105641_010 Hb_105641_010 Hb_158604_010--Hb_105641_010 Hb_000115_160 Hb_000115_160 Hb_158604_010--Hb_000115_160 Hb_008112_030 Hb_008112_030 Hb_158604_010--Hb_008112_030 Hb_007380_140 Hb_007380_140 Hb_158604_010--Hb_007380_140 Hb_011344_020 Hb_011344_020 Hb_000343_110--Hb_011344_020 Hb_000573_060 Hb_000573_060 Hb_000343_110--Hb_000573_060 Hb_002044_170 Hb_002044_170 Hb_000343_110--Hb_002044_170 Hb_000343_110--Hb_128743_010 Hb_000343_110--Hb_158604_010 Hb_000343_110--Hb_032920_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.13768 6.62792 2.69665 4.40317 8.67475 3.32002
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.66783 2.12019 2.64111 4.08938 2.63008

CAGE analysis