Hb_000720_070

Information

Type transcription factor
Description TF Family: HSF
Location Contig720: 110521-112975
Sequence    

Annotation

kegg
ID cic:CICLE_v10021287mg
description hypothetical protein
nr
ID KDP25483.1
description hypothetical protein JCGZ_20639 [Jatropha curcas]
swissprot
ID Q9T0D3
description Heat stress transcription factor B-2b OS=Arabidopsis thaliana GN=HSFB2B PE=2 SV=1
trembl
ID A0A067JRM8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20639 PE=3 SV=1
Gene Ontology
ID GO:0005634
description heat stress transcription factor b-2b

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55632: 110462-112938
cDNA
(Sanger)
(ID:Location)		 006_C03.ab1: 111823-112938

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000720_070 0.0 transcription factor TF Family: HSF hypothetical protein JCGZ_20639 [Jatropha curcas]
2 Hb_002965_030 0.1091780344 - - PREDICTED: uncharacterized protein LOC105643493 [Jatropha curcas]
3 Hb_001534_070 0.1109264728 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 38 [Eucalyptus grandis]
4 Hb_013394_060 0.1141381829 - - PREDICTED: IST1-like protein isoform X1 [Jatropha curcas]
5 Hb_005725_020 0.1171880703 transcription factor TF Family: bZIP PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Jatropha curcas]
6 Hb_027420_050 0.117539592 - - -
7 Hb_002999_060 0.1230750073 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 [Jatropha curcas]
8 Hb_002918_310 0.1252887202 - - PREDICTED: dnaJ protein homolog 1-like [Jatropha curcas]
9 Hb_000152_560 0.1272110177 - - hypothetical protein JCGZ_26236 [Jatropha curcas]
10 Hb_003710_040 0.1305725726 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
11 Hb_000107_530 0.131237676 - - calcium-dependent protein kinase, putative [Ricinus communis]
12 Hb_020805_010 0.1365837533 - - protein with unknown function [Ricinus communis]
13 Hb_000953_030 0.1367836194 transcription factor TF Family: HSF DNA binding protein, putative [Ricinus communis]
14 Hb_010584_010 0.1374747108 - - PREDICTED: probable zinc transporter protein DDB_G0282067 [Jatropha curcas]
15 Hb_010068_030 0.1382466458 - - aconitase, putative [Ricinus communis]
16 Hb_001221_160 0.1395264692 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
17 Hb_002499_070 0.1397702999 - - PREDICTED: uncharacterized protein LOC105628378 isoform X2 [Jatropha curcas]
18 Hb_000120_570 0.1401828357 - - Mlo protein [Hevea brasiliensis]
19 Hb_001902_060 0.1408176746 - - PREDICTED: U-box domain-containing protein 32 isoform X3 [Jatropha curcas]
20 Hb_000313_340 0.1408840661 - - DNA repair protein xp-E, putative [Ricinus communis]

Gene co-expression network

sample Hb_000720_070 Hb_000720_070 Hb_002965_030 Hb_002965_030 Hb_000720_070--Hb_002965_030 Hb_001534_070 Hb_001534_070 Hb_000720_070--Hb_001534_070 Hb_013394_060 Hb_013394_060 Hb_000720_070--Hb_013394_060 Hb_005725_020 Hb_005725_020 Hb_000720_070--Hb_005725_020 Hb_027420_050 Hb_027420_050 Hb_000720_070--Hb_027420_050 Hb_002999_060 Hb_002999_060 Hb_000720_070--Hb_002999_060 Hb_000735_100 Hb_000735_100 Hb_002965_030--Hb_000735_100 Hb_002965_030--Hb_013394_060 Hb_002896_060 Hb_002896_060 Hb_002965_030--Hb_002896_060 Hb_002965_030--Hb_002999_060 Hb_001946_240 Hb_001946_240 Hb_002965_030--Hb_001946_240 Hb_000120_570 Hb_000120_570 Hb_001534_070--Hb_000120_570 Hb_012340_020 Hb_012340_020 Hb_001534_070--Hb_012340_020 Hb_010068_030 Hb_010068_030 Hb_001534_070--Hb_010068_030 Hb_002918_310 Hb_002918_310 Hb_001534_070--Hb_002918_310 Hb_006501_060 Hb_006501_060 Hb_001534_070--Hb_006501_060 Hb_013394_060--Hb_002999_060 Hb_000483_380 Hb_000483_380 Hb_013394_060--Hb_000483_380 Hb_030827_060 Hb_030827_060 Hb_013394_060--Hb_030827_060 Hb_000538_010 Hb_000538_010 Hb_013394_060--Hb_000538_010 Hb_000487_100 Hb_000487_100 Hb_005725_020--Hb_000487_100 Hb_080147_030 Hb_080147_030 Hb_005725_020--Hb_080147_030 Hb_003125_060 Hb_003125_060 Hb_005725_020--Hb_003125_060 Hb_000107_530 Hb_000107_530 Hb_005725_020--Hb_000107_530 Hb_000152_890 Hb_000152_890 Hb_005725_020--Hb_000152_890 Hb_003710_040 Hb_003710_040 Hb_027420_050--Hb_003710_040 Hb_000264_010 Hb_000264_010 Hb_027420_050--Hb_000264_010 Hb_000640_200 Hb_000640_200 Hb_027420_050--Hb_000640_200 Hb_010584_010 Hb_010584_010 Hb_027420_050--Hb_010584_010 Hb_057451_010 Hb_057451_010 Hb_027420_050--Hb_057451_010 Hb_002999_060--Hb_030827_060 Hb_002999_060--Hb_000483_380 Hb_000422_110 Hb_000422_110 Hb_002999_060--Hb_000422_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
82.6914 116.892 28.3252 47.7063 215.621 101.828
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
25.5419 27.2425 39.8579 28.8658 19.597

CAGE analysis