Hb_027420_050

Information

Type -
Description -
Location Contig27420: 11454-19670
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_027420_050 0.0 - - -
2 Hb_003710_040 0.1104314722 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
3 Hb_000720_070 0.117539592 transcription factor TF Family: HSF hypothetical protein JCGZ_20639 [Jatropha curcas]
4 Hb_000264_010 0.1272885954 - - PREDICTED: uncharacterized protein LOC105649505 [Jatropha curcas]
5 Hb_000640_200 0.128230155 - - hypothetical protein RCOM_1346600 [Ricinus communis]
6 Hb_010584_010 0.1317188489 - - PREDICTED: probable zinc transporter protein DDB_G0282067 [Jatropha curcas]
7 Hb_057451_010 0.1334911099 - - PREDICTED: uncharacterized protein LOC105635588 [Jatropha curcas]
8 Hb_001575_080 0.1359914025 - - PREDICTED: villin-4-like [Jatropha curcas]
9 Hb_001221_160 0.1368641735 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
10 Hb_001080_270 0.1383704535 - - PREDICTED: NF-kappa-B-activating protein [Jatropha curcas]
11 Hb_000613_100 0.1389382653 - - PREDICTED: long chain acyl-CoA synthetase 8 [Jatropha curcas]
12 Hb_000107_530 0.1407220575 - - calcium-dependent protein kinase, putative [Ricinus communis]
13 Hb_002411_120 0.1409642496 - - PREDICTED: uncharacterized protein LOC105631645 [Jatropha curcas]
14 Hb_020805_010 0.1410578144 - - protein with unknown function [Ricinus communis]
15 Hb_078477_040 0.1426824082 - - nuclear movement protein nudc, putative [Ricinus communis]
16 Hb_000261_290 0.1429458097 - - eukaryotic translation elongation factor 1-alpha [Hevea brasiliensis]
17 Hb_004899_070 0.1430530675 - - PREDICTED: RRP12-like protein [Jatropha curcas]
18 Hb_005462_020 0.1446613953 - - PREDICTED: UBP1-associated protein 2A-like [Jatropha curcas]
19 Hb_000108_080 0.1449044957 - - PREDICTED: importin-5 [Jatropha curcas]
20 Hb_002066_080 0.1453099865 - - PREDICTED: protein CYPRO4 [Jatropha curcas]

Gene co-expression network

sample Hb_027420_050 Hb_027420_050 Hb_003710_040 Hb_003710_040 Hb_027420_050--Hb_003710_040 Hb_000720_070 Hb_000720_070 Hb_027420_050--Hb_000720_070 Hb_000264_010 Hb_000264_010 Hb_027420_050--Hb_000264_010 Hb_000640_200 Hb_000640_200 Hb_027420_050--Hb_000640_200 Hb_010584_010 Hb_010584_010 Hb_027420_050--Hb_010584_010 Hb_057451_010 Hb_057451_010 Hb_027420_050--Hb_057451_010 Hb_001221_160 Hb_001221_160 Hb_003710_040--Hb_001221_160 Hb_004899_070 Hb_004899_070 Hb_003710_040--Hb_004899_070 Hb_009028_030 Hb_009028_030 Hb_003710_040--Hb_009028_030 Hb_003710_040--Hb_000640_200 Hb_003710_040--Hb_057451_010 Hb_000261_290 Hb_000261_290 Hb_003710_040--Hb_000261_290 Hb_002965_030 Hb_002965_030 Hb_000720_070--Hb_002965_030 Hb_001534_070 Hb_001534_070 Hb_000720_070--Hb_001534_070 Hb_013394_060 Hb_013394_060 Hb_000720_070--Hb_013394_060 Hb_005725_020 Hb_005725_020 Hb_000720_070--Hb_005725_020 Hb_002999_060 Hb_002999_060 Hb_000720_070--Hb_002999_060 Hb_000021_040 Hb_000021_040 Hb_000264_010--Hb_000021_040 Hb_064903_010 Hb_064903_010 Hb_000264_010--Hb_064903_010 Hb_067193_010 Hb_067193_010 Hb_000264_010--Hb_067193_010 Hb_001301_090 Hb_001301_090 Hb_000264_010--Hb_001301_090 Hb_000101_350 Hb_000101_350 Hb_000264_010--Hb_000101_350 Hb_000951_110 Hb_000951_110 Hb_000264_010--Hb_000951_110 Hb_000640_200--Hb_004899_070 Hb_006501_020 Hb_006501_020 Hb_000640_200--Hb_006501_020 Hb_000640_200--Hb_057451_010 Hb_006588_050 Hb_006588_050 Hb_000640_200--Hb_006588_050 Hb_000813_100 Hb_000813_100 Hb_000640_200--Hb_000813_100 Hb_031069_020 Hb_031069_020 Hb_000640_200--Hb_031069_020 Hb_010584_010--Hb_057451_010 Hb_010584_010--Hb_009028_030 Hb_010584_010--Hb_003710_040 Hb_007257_050 Hb_007257_050 Hb_010584_010--Hb_007257_050 Hb_002609_010 Hb_002609_010 Hb_010584_010--Hb_002609_010 Hb_010584_010--Hb_000640_200 Hb_057451_010--Hb_009028_030 Hb_003157_010 Hb_003157_010 Hb_057451_010--Hb_003157_010 Hb_057451_010--Hb_004899_070 Hb_000313_340 Hb_000313_340 Hb_057451_010--Hb_000313_340
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.49485 2.15254 0.443692 1.29053 3.30431 3.06067
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.304134 0.717571 0.709486 0.869456 0.386846

CAGE analysis