Hb_001221_160

Information

Type -
Description -
Location Contig1221: 113058-114986
Sequence    

Annotation

kegg
ID pop:POPTR_0015s10690g
description POPTRDRAFT_575343; hypothetical protein
nr
ID XP_012079843.1
description PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
swissprot
ID Q9FGH9
description Exocyst complex component EXO70B1 OS=Arabidopsis thaliana GN=EXO70B1 PE=1 SV=1
trembl
ID A0A067K471
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11298 PE=4 SV=1
Gene Ontology
ID GO:0000145
description exocyst complex component exo70b1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001221_160 0.0 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
2 Hb_015475_020 0.0513409128 - - importin beta-1, putative [Ricinus communis]
3 Hb_004659_080 0.0651991565 - - PREDICTED: SWI/SNF complex subunit SWI3D isoform X1 [Jatropha curcas]
4 Hb_003858_090 0.0663281562 - - Filamin-A-interacting protein, putative [Ricinus communis]
5 Hb_003710_040 0.070991611 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
6 Hb_133047_010 0.0756443894 - - xanthine dehydrogenase, putative [Ricinus communis]
7 Hb_004899_070 0.0795339699 - - PREDICTED: RRP12-like protein [Jatropha curcas]
8 Hb_000544_060 0.0821082877 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]
9 Hb_002066_080 0.0824892284 - - PREDICTED: protein CYPRO4 [Jatropha curcas]
10 Hb_002392_030 0.082538625 - - WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related [Theobroma cacao]
11 Hb_004629_010 0.0835721155 - - PREDICTED: AP-3 complex subunit delta [Jatropha curcas]
12 Hb_002349_050 0.0844045391 transcription factor TF Family: MYB PREDICTED: uncharacterized protein LOC105645502 [Jatropha curcas]
13 Hb_003040_020 0.0845678694 - - PREDICTED: protein cereblon [Jatropha curcas]
14 Hb_007676_100 0.0850625408 - - PREDICTED: uncharacterized protein LOC105646857 [Jatropha curcas]
15 Hb_000753_100 0.0852749865 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105640677 isoform X1 [Jatropha curcas]
16 Hb_001080_270 0.0866688816 - - PREDICTED: NF-kappa-B-activating protein [Jatropha curcas]
17 Hb_157966_010 0.0869635035 - - hypothetical protein JCGZ_13877 [Jatropha curcas]
18 Hb_000062_470 0.0884181543 - - PREDICTED: cyclin-dependent kinase G-2 [Jatropha curcas]
19 Hb_000622_250 0.089455216 - - atpob1, putative [Ricinus communis]
20 Hb_000375_130 0.0901069037 - - Leucine-rich repeat transmembrane protein kinase family protein isoform 1 [Theobroma cacao]

Gene co-expression network

sample Hb_001221_160 Hb_001221_160 Hb_015475_020 Hb_015475_020 Hb_001221_160--Hb_015475_020 Hb_004659_080 Hb_004659_080 Hb_001221_160--Hb_004659_080 Hb_003858_090 Hb_003858_090 Hb_001221_160--Hb_003858_090 Hb_003710_040 Hb_003710_040 Hb_001221_160--Hb_003710_040 Hb_133047_010 Hb_133047_010 Hb_001221_160--Hb_133047_010 Hb_004899_070 Hb_004899_070 Hb_001221_160--Hb_004899_070 Hb_002349_050 Hb_002349_050 Hb_015475_020--Hb_002349_050 Hb_015475_020--Hb_003858_090 Hb_015475_020--Hb_133047_010 Hb_001080_270 Hb_001080_270 Hb_015475_020--Hb_001080_270 Hb_000753_100 Hb_000753_100 Hb_015475_020--Hb_000753_100 Hb_006252_020 Hb_006252_020 Hb_004659_080--Hb_006252_020 Hb_007676_100 Hb_007676_100 Hb_004659_080--Hb_007676_100 Hb_157966_010 Hb_157966_010 Hb_004659_080--Hb_157966_010 Hb_000622_250 Hb_000622_250 Hb_004659_080--Hb_000622_250 Hb_002392_030 Hb_002392_030 Hb_004659_080--Hb_002392_030 Hb_001243_060 Hb_001243_060 Hb_003858_090--Hb_001243_060 Hb_003858_090--Hb_000753_100 Hb_001141_370 Hb_001141_370 Hb_003858_090--Hb_001141_370 Hb_000152_340 Hb_000152_340 Hb_003858_090--Hb_000152_340 Hb_003710_040--Hb_004899_070 Hb_009028_030 Hb_009028_030 Hb_003710_040--Hb_009028_030 Hb_000640_200 Hb_000640_200 Hb_003710_040--Hb_000640_200 Hb_057451_010 Hb_057451_010 Hb_003710_040--Hb_057451_010 Hb_000261_290 Hb_000261_290 Hb_003710_040--Hb_000261_290 Hb_111985_080 Hb_111985_080 Hb_133047_010--Hb_111985_080 Hb_004884_010 Hb_004884_010 Hb_133047_010--Hb_004884_010 Hb_133047_010--Hb_002392_030 Hb_034243_020 Hb_034243_020 Hb_133047_010--Hb_034243_020 Hb_002301_080 Hb_002301_080 Hb_133047_010--Hb_002301_080 Hb_148909_030 Hb_148909_030 Hb_133047_010--Hb_148909_030 Hb_000098_130 Hb_000098_130 Hb_004899_070--Hb_000098_130 Hb_004899_070--Hb_000261_290 Hb_000120_620 Hb_000120_620 Hb_004899_070--Hb_000120_620 Hb_004970_160 Hb_004970_160 Hb_004899_070--Hb_004970_160 Hb_004899_070--Hb_000640_200 Hb_000813_100 Hb_000813_100 Hb_004899_070--Hb_000813_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
60.9129 93.1172 27.17 36.6986 92.1554 75.6677
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.5671 17.1727 26.124 36.2469 29.8139

CAGE analysis