Hb_002965_030

Information

Type -
Description -
Location Contig2965: 20911-25210
Sequence    

Annotation

kegg
ID rcu:RCOM_0999300
description hypothetical protein
nr
ID XP_012084012.1
description PREDICTED: uncharacterized protein LOC105643493 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K6I0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18950 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31011: 21069-25198
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002965_030 0.0 - - PREDICTED: uncharacterized protein LOC105643493 [Jatropha curcas]
2 Hb_000735_100 0.1036549927 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Jatropha curcas]
3 Hb_000720_070 0.1091780344 transcription factor TF Family: HSF hypothetical protein JCGZ_20639 [Jatropha curcas]
4 Hb_013394_060 0.1092994126 - - PREDICTED: IST1-like protein isoform X1 [Jatropha curcas]
5 Hb_002896_060 0.1206880133 - - PREDICTED: synaptotagmin-2 [Jatropha curcas]
6 Hb_002999_060 0.1209821663 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 [Jatropha curcas]
7 Hb_001946_240 0.1223464352 - - PREDICTED: chaperone protein dnaJ 49-like [Jatropha curcas]
8 Hb_000483_380 0.128074699 - - PREDICTED: bax inhibitor 1-like [Jatropha curcas]
9 Hb_001301_090 0.1286973915 - - conserved hypothetical protein [Ricinus communis]
10 Hb_013818_030 0.1287178202 - - conserved hypothetical protein [Ricinus communis]
11 Hb_003858_090 0.1294400393 - - Filamin-A-interacting protein, putative [Ricinus communis]
12 Hb_000375_030 0.130806236 - - -
13 Hb_004376_030 0.1322903048 transcription factor TF Family: mTERF hypothetical protein PHAVU_005G060900g [Phaseolus vulgaris]
14 Hb_000025_650 0.1325025736 - - exosome complex exonuclease rrp45, putative [Ricinus communis]
15 Hb_000365_140 0.1332812098 - - PREDICTED: ethanolamine-phosphate cytidylyltransferase [Jatropha curcas]
16 Hb_000953_030 0.1345027642 transcription factor TF Family: HSF DNA binding protein, putative [Ricinus communis]
17 Hb_009558_040 0.1349161849 transcription factor TF Family: MYB hypothetical protein PHAVU_008G102000g [Phaseolus vulgaris]
18 Hb_002918_310 0.1365220552 - - PREDICTED: dnaJ protein homolog 1-like [Jatropha curcas]
19 Hb_156144_030 0.1365281977 - - hypothetical protein RCOM_0187400 [Ricinus communis]
20 Hb_001051_090 0.1399341274 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 11 [Jatropha curcas]

Gene co-expression network

sample Hb_002965_030 Hb_002965_030 Hb_000735_100 Hb_000735_100 Hb_002965_030--Hb_000735_100 Hb_000720_070 Hb_000720_070 Hb_002965_030--Hb_000720_070 Hb_013394_060 Hb_013394_060 Hb_002965_030--Hb_013394_060 Hb_002896_060 Hb_002896_060 Hb_002965_030--Hb_002896_060 Hb_002999_060 Hb_002999_060 Hb_002965_030--Hb_002999_060 Hb_001946_240 Hb_001946_240 Hb_002965_030--Hb_001946_240 Hb_028872_120 Hb_028872_120 Hb_000735_100--Hb_028872_120 Hb_000025_650 Hb_000025_650 Hb_000735_100--Hb_000025_650 Hb_002249_120 Hb_002249_120 Hb_000735_100--Hb_002249_120 Hb_005408_020 Hb_005408_020 Hb_000735_100--Hb_005408_020 Hb_000661_020 Hb_000661_020 Hb_000735_100--Hb_000661_020 Hb_000076_260 Hb_000076_260 Hb_000735_100--Hb_000076_260 Hb_001534_070 Hb_001534_070 Hb_000720_070--Hb_001534_070 Hb_000720_070--Hb_013394_060 Hb_005725_020 Hb_005725_020 Hb_000720_070--Hb_005725_020 Hb_027420_050 Hb_027420_050 Hb_000720_070--Hb_027420_050 Hb_000720_070--Hb_002999_060 Hb_013394_060--Hb_002999_060 Hb_000483_380 Hb_000483_380 Hb_013394_060--Hb_000483_380 Hb_030827_060 Hb_030827_060 Hb_013394_060--Hb_030827_060 Hb_000538_010 Hb_000538_010 Hb_013394_060--Hb_000538_010 Hb_001051_090 Hb_001051_090 Hb_002896_060--Hb_001051_090 Hb_027380_030 Hb_027380_030 Hb_002896_060--Hb_027380_030 Hb_002092_100 Hb_002092_100 Hb_002896_060--Hb_002092_100 Hb_000453_140 Hb_000453_140 Hb_002896_060--Hb_000453_140 Hb_001952_120 Hb_001952_120 Hb_002896_060--Hb_001952_120 Hb_002805_060 Hb_002805_060 Hb_002896_060--Hb_002805_060 Hb_002999_060--Hb_030827_060 Hb_002999_060--Hb_000483_380 Hb_000422_110 Hb_000422_110 Hb_002999_060--Hb_000422_110 Hb_000116_460 Hb_000116_460 Hb_001946_240--Hb_000116_460 Hb_000504_160 Hb_000504_160 Hb_001946_240--Hb_000504_160 Hb_003540_160 Hb_003540_160 Hb_001946_240--Hb_003540_160 Hb_001473_080 Hb_001473_080 Hb_001946_240--Hb_001473_080 Hb_002675_040 Hb_002675_040 Hb_001946_240--Hb_002675_040 Hb_000953_030 Hb_000953_030 Hb_001946_240--Hb_000953_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
34.8292 37.5968 19.9745 22.857 77.1182 28.7512
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.8918 8.87465 11.1389 9.34232 14.6776

CAGE analysis