Hb_002918_310

Information

Type -
Description -
Location Contig2918: 250113-253139
Sequence    

Annotation

kegg
ID rcu:RCOM_1673240
description Protein SIS1, putative
nr
ID XP_012091667.1
description PREDICTED: dnaJ protein homolog 1-like [Jatropha curcas]
swissprot
ID Q80Y75
description DnaJ homolog subfamily B member 13 OS=Mus musculus GN=Dnajb13 PE=2 SV=1
trembl
ID A0A067JNB8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21480 PE=4 SV=1
Gene Ontology
ID GO:0051082
description dnaj homolog subfamily b member 13-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30628: 250305-253040
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002918_310 0.0 - - PREDICTED: dnaJ protein homolog 1-like [Jatropha curcas]
2 Hb_000720_070 0.1252887202 transcription factor TF Family: HSF hypothetical protein JCGZ_20639 [Jatropha curcas]
3 Hb_001534_070 0.1332821915 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 38 [Eucalyptus grandis]
4 Hb_012340_020 0.1339880475 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial [Jatropha curcas]
5 Hb_002965_030 0.1365220552 - - PREDICTED: uncharacterized protein LOC105643493 [Jatropha curcas]
6 Hb_035947_010 0.143447168 - - PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Elaeis guineensis]
7 Hb_000152_560 0.1509308807 - - hypothetical protein JCGZ_26236 [Jatropha curcas]
8 Hb_009558_040 0.1547617142 transcription factor TF Family: MYB hypothetical protein PHAVU_008G102000g [Phaseolus vulgaris]
9 Hb_010068_030 0.1574682807 - - aconitase, putative [Ricinus communis]
10 Hb_002999_060 0.1582926042 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 [Jatropha curcas]
11 Hb_003327_030 0.1583415225 - - Hsc70-interacting protein, putative [Ricinus communis]
12 Hb_000258_130 0.1618679023 - - -
13 Hb_097433_010 0.1634155144 - - PREDICTED: TPR repeat-containing thioredoxin TDX [Jatropha curcas]
14 Hb_006816_120 0.1639383896 - - Nicotianamine synthase, putative [Ricinus communis]
15 Hb_000008_230 0.1672322413 - - hypothetical protein POPTR_0004s22120g [Populus trichocarpa]
16 Hb_013394_060 0.1675140753 - - PREDICTED: IST1-like protein isoform X1 [Jatropha curcas]
17 Hb_002814_120 0.1691010004 - - PREDICTED: uncharacterized protein LOC105633463 [Jatropha curcas]
18 Hb_000040_050 0.1713090122 - - PREDICTED: uncharacterized protein LOC102617857 isoform X1 [Citrus sinensis]
19 Hb_000755_080 0.1751447292 - - hypothetical protein RCOM_1016710 [Ricinus communis]
20 Hb_008749_050 0.1753067077 - - PREDICTED: uncharacterized J domain-containing protein C4H3.01 [Jatropha curcas]

Gene co-expression network

sample Hb_002918_310 Hb_002918_310 Hb_000720_070 Hb_000720_070 Hb_002918_310--Hb_000720_070 Hb_001534_070 Hb_001534_070 Hb_002918_310--Hb_001534_070 Hb_012340_020 Hb_012340_020 Hb_002918_310--Hb_012340_020 Hb_002965_030 Hb_002965_030 Hb_002918_310--Hb_002965_030 Hb_035947_010 Hb_035947_010 Hb_002918_310--Hb_035947_010 Hb_000152_560 Hb_000152_560 Hb_002918_310--Hb_000152_560 Hb_000720_070--Hb_002965_030 Hb_000720_070--Hb_001534_070 Hb_013394_060 Hb_013394_060 Hb_000720_070--Hb_013394_060 Hb_005725_020 Hb_005725_020 Hb_000720_070--Hb_005725_020 Hb_027420_050 Hb_027420_050 Hb_000720_070--Hb_027420_050 Hb_002999_060 Hb_002999_060 Hb_000720_070--Hb_002999_060 Hb_000120_570 Hb_000120_570 Hb_001534_070--Hb_000120_570 Hb_001534_070--Hb_012340_020 Hb_010068_030 Hb_010068_030 Hb_001534_070--Hb_010068_030 Hb_006501_060 Hb_006501_060 Hb_001534_070--Hb_006501_060 Hb_002374_440 Hb_002374_440 Hb_012340_020--Hb_002374_440 Hb_000206_130 Hb_000206_130 Hb_012340_020--Hb_000206_130 Hb_012340_020--Hb_010068_030 Hb_003688_200 Hb_003688_200 Hb_012340_020--Hb_003688_200 Hb_000735_100 Hb_000735_100 Hb_002965_030--Hb_000735_100 Hb_002965_030--Hb_013394_060 Hb_002896_060 Hb_002896_060 Hb_002965_030--Hb_002896_060 Hb_002965_030--Hb_002999_060 Hb_001946_240 Hb_001946_240 Hb_002965_030--Hb_001946_240 Hb_003327_030 Hb_003327_030 Hb_035947_010--Hb_003327_030 Hb_097433_010 Hb_097433_010 Hb_035947_010--Hb_097433_010 Hb_003751_060 Hb_003751_060 Hb_035947_010--Hb_003751_060 Hb_001083_030 Hb_001083_030 Hb_035947_010--Hb_001083_030 Hb_002387_020 Hb_002387_020 Hb_035947_010--Hb_002387_020 Hb_003097_190 Hb_003097_190 Hb_000152_560--Hb_003097_190 Hb_000614_080 Hb_000614_080 Hb_000152_560--Hb_000614_080 Hb_000152_890 Hb_000152_890 Hb_000152_560--Hb_000152_890 Hb_000152_560--Hb_010068_030 Hb_029866_130 Hb_029866_130 Hb_000152_560--Hb_029866_130 Hb_001057_010 Hb_001057_010 Hb_000152_560--Hb_001057_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
326.362 339.141 71.5091 113.688 951.826 248.792
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
132.678 95.6746 106.591 47.8831 119.008

CAGE analysis