Hb_097433_010

Information

Type -
Description -
Location Contig97433: 737-1419
Sequence    

Annotation

kegg
ID rcu:RCOM_0569180
description Hsc70-interacting protein, putative
nr
ID XP_012064638.1
description PREDICTED: TPR repeat-containing thioredoxin TDX [Jatropha curcas]
swissprot
ID Q6ES52
description TPR repeat-containing thioredoxin TDX OS=Oryza sativa subsp. japonica GN=Os09g0401200 PE=2 SV=1
trembl
ID A0A067LAR3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22922 PE=4 SV=1
Gene Ontology
ID GO:0015035
description tpr repeat-containing thioredoxin tdx

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_097433_010 0.0 - - PREDICTED: TPR repeat-containing thioredoxin TDX [Jatropha curcas]
2 Hb_003327_030 0.0844108453 - - Hsc70-interacting protein, putative [Ricinus communis]
3 Hb_035947_010 0.1244658522 - - PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Elaeis guineensis]
4 Hb_085375_010 0.1455473137 - - protein with unknown function [Ricinus communis]
5 Hb_002918_310 0.1634155144 - - PREDICTED: dnaJ protein homolog 1-like [Jatropha curcas]
6 Hb_004635_130 0.1658561672 - - PREDICTED: probable small nuclear ribonucleoprotein G [Populus euphratica]
7 Hb_002814_120 0.1711149304 - - PREDICTED: uncharacterized protein LOC105633463 [Jatropha curcas]
8 Hb_000008_230 0.1746501925 - - hypothetical protein POPTR_0004s22120g [Populus trichocarpa]
9 Hb_000941_140 0.1851747814 - - PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Jatropha curcas]
10 Hb_008749_050 0.1857292703 - - PREDICTED: uncharacterized J domain-containing protein C4H3.01 [Jatropha curcas]
11 Hb_002311_250 0.1870907273 - - hypothetical protein JCGZ_18936 [Jatropha curcas]
12 Hb_013394_060 0.1939898479 - - PREDICTED: IST1-like protein isoform X1 [Jatropha curcas]
13 Hb_002344_090 0.1946499653 - - PREDICTED: uncharacterized protein LOC105637976 [Jatropha curcas]
14 Hb_004712_110 0.1990771048 - - 30S ribosomal protein S10, putative [Ricinus communis]
15 Hb_001946_360 0.1993017176 - - PREDICTED: nuclear pore complex protein NUP88 [Jatropha curcas]
16 Hb_000755_080 0.2004174247 - - hypothetical protein RCOM_1016710 [Ricinus communis]
17 Hb_002965_030 0.2048232814 - - PREDICTED: uncharacterized protein LOC105643493 [Jatropha curcas]
18 Hb_001433_020 0.2102749097 - - PREDICTED: bidirectional sugar transporter SWEET16-like [Jatropha curcas]
19 Hb_001534_070 0.2126435313 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 38 [Eucalyptus grandis]
20 Hb_009558_040 0.2139041512 transcription factor TF Family: MYB hypothetical protein PHAVU_008G102000g [Phaseolus vulgaris]

Gene co-expression network

sample Hb_097433_010 Hb_097433_010 Hb_003327_030 Hb_003327_030 Hb_097433_010--Hb_003327_030 Hb_035947_010 Hb_035947_010 Hb_097433_010--Hb_035947_010 Hb_085375_010 Hb_085375_010 Hb_097433_010--Hb_085375_010 Hb_002918_310 Hb_002918_310 Hb_097433_010--Hb_002918_310 Hb_004635_130 Hb_004635_130 Hb_097433_010--Hb_004635_130 Hb_002814_120 Hb_002814_120 Hb_097433_010--Hb_002814_120 Hb_003327_030--Hb_035947_010 Hb_003327_030--Hb_002814_120 Hb_000406_040 Hb_000406_040 Hb_003327_030--Hb_000406_040 Hb_003327_030--Hb_004635_130 Hb_003327_030--Hb_002918_310 Hb_003751_060 Hb_003751_060 Hb_035947_010--Hb_003751_060 Hb_035947_010--Hb_002918_310 Hb_001083_030 Hb_001083_030 Hb_035947_010--Hb_001083_030 Hb_002387_020 Hb_002387_020 Hb_035947_010--Hb_002387_020 Hb_000008_230 Hb_000008_230 Hb_085375_010--Hb_000008_230 Hb_004712_110 Hb_004712_110 Hb_085375_010--Hb_004712_110 Hb_003125_140 Hb_003125_140 Hb_085375_010--Hb_003125_140 Hb_000206_130 Hb_000206_130 Hb_085375_010--Hb_000206_130 Hb_000580_130 Hb_000580_130 Hb_085375_010--Hb_000580_130 Hb_000720_070 Hb_000720_070 Hb_002918_310--Hb_000720_070 Hb_001534_070 Hb_001534_070 Hb_002918_310--Hb_001534_070 Hb_012340_020 Hb_012340_020 Hb_002918_310--Hb_012340_020 Hb_002965_030 Hb_002965_030 Hb_002918_310--Hb_002965_030 Hb_000152_560 Hb_000152_560 Hb_002918_310--Hb_000152_560 Hb_000755_080 Hb_000755_080 Hb_004635_130--Hb_000755_080 Hb_001051_090 Hb_001051_090 Hb_004635_130--Hb_001051_090 Hb_000787_090 Hb_000787_090 Hb_004635_130--Hb_000787_090 Hb_002896_060 Hb_002896_060 Hb_004635_130--Hb_002896_060 Hb_004635_130--Hb_002814_120 Hb_001009_290 Hb_001009_290 Hb_002814_120--Hb_001009_290 Hb_002814_120--Hb_000755_080 Hb_011512_060 Hb_011512_060 Hb_002814_120--Hb_011512_060 Hb_012132_030 Hb_012132_030 Hb_002814_120--Hb_012132_030 Hb_006452_090 Hb_006452_090 Hb_002814_120--Hb_006452_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
50.6672 52.8616 35.8053 18.5435 274.831 29.3714
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.7568 20.8659 37.4416 22.9192 29.2769

CAGE analysis