Hb_007813_030

Information

Type desease resistance
Description Gene Name: NB-ARC
Location Contig7813: 38552-42208
Sequence    

Annotation

kegg
ID pmum:103339409
description putative disease resistance protein At4g19050
nr
ID XP_012075081.1
description PREDICTED: putative disease resistance protein At4g19050 [Jatropha curcas]
swissprot
ID P0CB16
description Putative disease resistance protein At4g19050 OS=Arabidopsis thaliana GN=At4g19050 PE=3 SV=2
trembl
ID A0A067KU99
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10817 PE=4 SV=1
Gene Ontology
ID GO:0005515
description disease resistance protein at4g19050

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57984: 38845-39360
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007813_030 0.0 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At4g19050 [Jatropha curcas]
2 Hb_000661_200 0.061254195 - - PREDICTED: uncharacterized protein LOC105648311 isoform X1 [Jatropha curcas]
3 Hb_000062_470 0.0680492116 - - PREDICTED: cyclin-dependent kinase G-2 [Jatropha curcas]
4 Hb_000197_290 0.070361864 - - PREDICTED: A-agglutinin anchorage subunit [Jatropha curcas]
5 Hb_000574_510 0.0797653505 - - protein kinase, putative [Ricinus communis]
6 Hb_052764_060 0.080600467 - - XPA-binding protein, putative [Ricinus communis]
7 Hb_005104_010 0.0819639133 - - PREDICTED: uncharacterized protein LOC105140796 isoform X1 [Populus euphratica]
8 Hb_000544_060 0.0823663474 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]
9 Hb_001231_030 0.0825280503 - - PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Jatropha curcas]
10 Hb_002282_060 0.0826151868 transcription factor TF Family: bZIP DNA binding protein, putative [Ricinus communis]
11 Hb_000260_640 0.0846056396 - - PREDICTED: uncharacterized protein At1g51745 [Jatropha curcas]
12 Hb_003858_090 0.0849833933 - - Filamin-A-interacting protein, putative [Ricinus communis]
13 Hb_002073_280 0.0864488314 - - PREDICTED: phospholipid-transporting ATPase 3 isoform X1 [Jatropha curcas]
14 Hb_000422_110 0.0875988904 - - PREDICTED: uncharacterized protein At1g08160-like [Jatropha curcas]
15 Hb_013749_020 0.0899165713 - - PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1 [Jatropha curcas]
16 Hb_005214_150 0.0906801258 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105636019 [Jatropha curcas]
17 Hb_001277_300 0.0906803638 - - PREDICTED: uncharacterized protein LOC105632051 isoform X4 [Jatropha curcas]
18 Hb_000917_160 0.0912648934 - - PREDICTED: protein decapping 5 isoform X1 [Jatropha curcas]
19 Hb_001488_270 0.0913963197 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Jatropha curcas]
20 Hb_010417_060 0.0918647741 - - PREDICTED: protein SGT1 homolog A-like [Jatropha curcas]

Gene co-expression network

sample Hb_007813_030 Hb_007813_030 Hb_000661_200 Hb_000661_200 Hb_007813_030--Hb_000661_200 Hb_000062_470 Hb_000062_470 Hb_007813_030--Hb_000062_470 Hb_000197_290 Hb_000197_290 Hb_007813_030--Hb_000197_290 Hb_000574_510 Hb_000574_510 Hb_007813_030--Hb_000574_510 Hb_052764_060 Hb_052764_060 Hb_007813_030--Hb_052764_060 Hb_005104_010 Hb_005104_010 Hb_007813_030--Hb_005104_010 Hb_000661_200--Hb_052764_060 Hb_000544_060 Hb_000544_060 Hb_000661_200--Hb_000544_060 Hb_000661_200--Hb_000062_470 Hb_001959_020 Hb_001959_020 Hb_000661_200--Hb_001959_020 Hb_001021_200 Hb_001021_200 Hb_000661_200--Hb_001021_200 Hb_000191_130 Hb_000191_130 Hb_000062_470--Hb_000191_130 Hb_000917_160 Hb_000917_160 Hb_000062_470--Hb_000917_160 Hb_010417_060 Hb_010417_060 Hb_000062_470--Hb_010417_060 Hb_004429_160 Hb_004429_160 Hb_000062_470--Hb_004429_160 Hb_001488_270 Hb_001488_270 Hb_000197_290--Hb_001488_270 Hb_000197_290--Hb_000574_510 Hb_000197_290--Hb_000062_470 Hb_003604_040 Hb_003604_040 Hb_000197_290--Hb_003604_040 Hb_003120_070 Hb_003120_070 Hb_000197_290--Hb_003120_070 Hb_000574_510--Hb_000544_060 Hb_000574_510--Hb_003604_040 Hb_000574_510--Hb_000661_200 Hb_011671_230 Hb_011671_230 Hb_000574_510--Hb_011671_230 Hb_006663_040 Hb_006663_040 Hb_052764_060--Hb_006663_040 Hb_052764_060--Hb_000544_060 Hb_018133_050 Hb_018133_050 Hb_052764_060--Hb_018133_050 Hb_000832_320 Hb_000832_320 Hb_052764_060--Hb_000832_320 Hb_004480_040 Hb_004480_040 Hb_052764_060--Hb_004480_040 Hb_005104_010--Hb_001021_200 Hb_004629_010 Hb_004629_010 Hb_005104_010--Hb_004629_010 Hb_000120_660 Hb_000120_660 Hb_005104_010--Hb_000120_660 Hb_000786_040 Hb_000786_040 Hb_005104_010--Hb_000786_040 Hb_000345_150 Hb_000345_150 Hb_005104_010--Hb_000345_150 Hb_003106_030 Hb_003106_030 Hb_005104_010--Hb_003106_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.14207 6.75144 2.2652 2.38278 4.86924 3.60543
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.32889 1.14758 1.33173 2.00576 3.2291

CAGE analysis