Hb_012262_040

Information

Type -
Description -
Location Contig12262: 44278-46623
Sequence    

Annotation

kegg
ID rcu:RCOM_1592330
description signal peptidase I, putative (EC:3.4.21.89)
nr
ID XP_012071722.1
description PREDICTED: uncharacterized protein LOC105633697 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L2S5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04334 PE=4 SV=1
Gene Ontology
ID GO:0016021
description signal peptidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06882: 44342-46617
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012262_040 0.0 - - PREDICTED: uncharacterized protein LOC105633697 [Jatropha curcas]
2 Hb_002045_170 0.0888711859 - - interferon-induced guanylate-binding protein, putative [Ricinus communis]
3 Hb_001427_210 0.0897223979 - - PREDICTED: uncharacterized protein LOC105637797 isoform X1 [Jatropha curcas]
4 Hb_000862_100 0.0976490442 - - PREDICTED: plastid division protein CDP1, chloroplastic [Jatropha curcas]
5 Hb_000359_190 0.0977962567 - - PREDICTED: protein VACUOLELESS1 [Nicotiana sylvestris]
6 Hb_001153_050 0.0979274037 - - PREDICTED: protein FIZZY-RELATED 2 [Jatropha curcas]
7 Hb_002311_190 0.0984785121 - - PREDICTED: uncharacterized protein LOC105643493 [Jatropha curcas]
8 Hb_001677_200 0.1008800603 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000336_020 0.1009423531 - - PREDICTED: phospholipid-transporting ATPase 2 [Jatropha curcas]
10 Hb_000903_010 0.1012855931 - - hypothetical protein JCGZ_23825 [Jatropha curcas]
11 Hb_007597_010 0.1014579967 - - hypothetical protein B456_010G072300 [Gossypium raimondii]
12 Hb_006022_010 0.1024798861 - - PREDICTED: uncharacterized protein LOC105628883 [Jatropha curcas]
13 Hb_001194_020 0.1035579406 - - microtubule associated protein xmap215, putative [Ricinus communis]
14 Hb_005895_010 0.1053871771 - - PREDICTED: uncharacterized protein LOC105643387 isoform X1 [Jatropha curcas]
15 Hb_000954_010 0.1053934019 - - PREDICTED: uncharacterized protein LOC105646975 [Jatropha curcas]
16 Hb_001623_110 0.1054359472 - - PREDICTED: xylosyltransferase 1 [Jatropha curcas]
17 Hb_000347_040 0.1056470816 - - hypothetical protein JCGZ_24660 [Jatropha curcas]
18 Hb_044486_020 0.106932112 - - CASTOR protein [Glycine max]
19 Hb_000562_070 0.1070922126 - - PREDICTED: uncharacterized protein LOC105635371 isoform X1 [Jatropha curcas]
20 Hb_001002_060 0.1076611206 - - PREDICTED: putative GPI-anchor transamidase [Jatropha curcas]

Gene co-expression network

sample Hb_012262_040 Hb_012262_040 Hb_002045_170 Hb_002045_170 Hb_012262_040--Hb_002045_170 Hb_001427_210 Hb_001427_210 Hb_012262_040--Hb_001427_210 Hb_000862_100 Hb_000862_100 Hb_012262_040--Hb_000862_100 Hb_000359_190 Hb_000359_190 Hb_012262_040--Hb_000359_190 Hb_001153_050 Hb_001153_050 Hb_012262_040--Hb_001153_050 Hb_002311_190 Hb_002311_190 Hb_012262_040--Hb_002311_190 Hb_004724_390 Hb_004724_390 Hb_002045_170--Hb_004724_390 Hb_000954_010 Hb_000954_010 Hb_002045_170--Hb_000954_010 Hb_001250_050 Hb_001250_050 Hb_002045_170--Hb_001250_050 Hb_002687_180 Hb_002687_180 Hb_002045_170--Hb_002687_180 Hb_001246_130 Hb_001246_130 Hb_002045_170--Hb_001246_130 Hb_000317_110 Hb_000317_110 Hb_002045_170--Hb_000317_110 Hb_003470_070 Hb_003470_070 Hb_001427_210--Hb_003470_070 Hb_000175_630 Hb_000175_630 Hb_001427_210--Hb_000175_630 Hb_000562_070 Hb_000562_070 Hb_001427_210--Hb_000562_070 Hb_000098_240 Hb_000098_240 Hb_001427_210--Hb_000098_240 Hb_020141_040 Hb_020141_040 Hb_001427_210--Hb_020141_040 Hb_004705_160 Hb_004705_160 Hb_000862_100--Hb_004705_160 Hb_006970_020 Hb_006970_020 Hb_000862_100--Hb_006970_020 Hb_068079_010 Hb_068079_010 Hb_000862_100--Hb_068079_010 Hb_000815_300 Hb_000815_300 Hb_000862_100--Hb_000815_300 Hb_001159_060 Hb_001159_060 Hb_000862_100--Hb_001159_060 Hb_000406_210 Hb_000406_210 Hb_000862_100--Hb_000406_210 Hb_000358_100 Hb_000358_100 Hb_000359_190--Hb_000358_100 Hb_044486_020 Hb_044486_020 Hb_000359_190--Hb_044486_020 Hb_000020_160 Hb_000020_160 Hb_000359_190--Hb_000020_160 Hb_183086_030 Hb_183086_030 Hb_000359_190--Hb_183086_030 Hb_021977_010 Hb_021977_010 Hb_000359_190--Hb_021977_010 Hb_000103_290 Hb_000103_290 Hb_000359_190--Hb_000103_290 Hb_006573_160 Hb_006573_160 Hb_001153_050--Hb_006573_160 Hb_073973_150 Hb_073973_150 Hb_001153_050--Hb_073973_150 Hb_002814_110 Hb_002814_110 Hb_001153_050--Hb_002814_110 Hb_011972_020 Hb_011972_020 Hb_001153_050--Hb_011972_020 Hb_005323_010 Hb_005323_010 Hb_001153_050--Hb_005323_010 Hb_005895_010 Hb_005895_010 Hb_001153_050--Hb_005895_010 Hb_006022_010 Hb_006022_010 Hb_002311_190--Hb_006022_010 Hb_000503_020 Hb_000503_020 Hb_002311_190--Hb_000503_020 Hb_001623_110 Hb_001623_110 Hb_002311_190--Hb_001623_110 Hb_004738_030 Hb_004738_030 Hb_002311_190--Hb_004738_030 Hb_001349_030 Hb_001349_030 Hb_002311_190--Hb_001349_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.9819 17.7864 26.9859 29.6139 21.2835 13
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.91298 9.27871 5.77616 11.9222 26.7192

CAGE analysis